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. 2004 Mar;186(6):1793–1801. doi: 10.1128/JB.186.6.1793-1801.2004

TABLE 6.

Promoter activities of sea-sed hybrid promotersa

Plasmid Sequenceb CAT values (Agr wt/Agr Δ)c ASId
sea mutant promoters
    pZS2962 (wt) TAGACAAATATAAAAAGTGTATAGTAATATATGTATGTATAATTAAATG 289.6 ± 7.1/305.6 ± 19.6 1.0
    pZS2963 ----------------------------ATGAAA--------------- 365.9 ± 18.6/316.0 ± 17.1 1.2
    pZS2964 ATGAAA------------------------------------------- 256.7 ± 23.2/164.8 ± 12.7 1.6*
    pZS2965 ATGAAA----------------------ATGAAA--------------- 66.9 ± 4.4/56.9 ± 6.7 1.2
    pDT26 ATGAAA------------------TATAATGAAA--------------- 33.6 ± 1.1/4.8 ± 0.5 6.8*
    pDT27 ------------------------TATAATGAAA--------------- 295.4 ± 26.1/235.8 ± 19.9 1.3
sed mutant promoters
    pZS2704 (wt) ATGAAATGGATCAAATATATTGATATAATGAAAGTGAGCAAGTTGGATAGATTGCGGC 131.7 ± 6.1/58.2 ± 2.5 2.3*
    pDT28 TAGACA--------------------------------------------- 445.8 ± 24.8/333.4 ± 42.8 1.3*
    pDT29 TAGACA-----------------TAATATATGT------------------ 256.9 ± 14.4/213.2 ± 10.7 1.2*
    pDT30 -----------------------TAATATATGT------------------ 9.8 ± 0.7/3.9 ± 0.7 2.5*
a

wt, wild type.

b

Boldface sequences are the −35 and −10 promoter elements. For hybrid promoters with the sea promoter as the backbone, the dashes represent bases identical to those in the wild-type sea sequence and the sed base substitutions are indicated. For hybrid promoters with the sed promoter as the backbone, the dashes represent bases identical to those in the wild-type sed sequence and the sea base substitutions are indicated.

c

Means ± standard deviations (in nanomoles per milligram of cell dry weight per minute). Each value represents the average of at least four determinants. Agr Δ, agr mutant.

d

ASI, Agr stimulation index (ratio of activity of the promoter in a wild-type host to that in an Agr deletion mutant). An asterisk indicates that results for agr mutant and agr+ hosts were significantly different.