TABLE 6.
Promoter activities of sea-sed hybrid promotersa
| Plasmid | Sequenceb | CAT values (Agr wt/Agr Δ)c | ASId |
|---|---|---|---|
| sea mutant promoters | |||
| pZS2962 (wt) | TAGACAAATATAAAAAGTGTATAGTAATATATGTATGTATAATTAAATG | 289.6 ± 7.1/305.6 ± 19.6 | 1.0 |
| pZS2963 | ----------------------------ATGAAA--------------- | 365.9 ± 18.6/316.0 ± 17.1 | 1.2 |
| pZS2964 | ATGAAA------------------------------------------- | 256.7 ± 23.2/164.8 ± 12.7 | 1.6* |
| pZS2965 | ATGAAA----------------------ATGAAA--------------- | 66.9 ± 4.4/56.9 ± 6.7 | 1.2 |
| pDT26 | ATGAAA------------------TATAATGAAA--------------- | 33.6 ± 1.1/4.8 ± 0.5 | 6.8* |
| pDT27 | ------------------------TATAATGAAA--------------- | 295.4 ± 26.1/235.8 ± 19.9 | 1.3 |
| sed mutant promoters | |||
| pZS2704 (wt) | ATGAAATGGATCAAATATATTGATATAATGAAAGTGAGCAAGTTGGATAGATTGCGGC | 131.7 ± 6.1/58.2 ± 2.5 | 2.3* |
| pDT28 | TAGACA--------------------------------------------- | 445.8 ± 24.8/333.4 ± 42.8 | 1.3* |
| pDT29 | TAGACA-----------------TAATATATGT------------------ | 256.9 ± 14.4/213.2 ± 10.7 | 1.2* |
| pDT30 | -----------------------TAATATATGT------------------ | 9.8 ± 0.7/3.9 ± 0.7 | 2.5* |
wt, wild type.
Boldface sequences are the −35 and −10 promoter elements. For hybrid promoters with the sea promoter as the backbone, the dashes represent bases identical to those in the wild-type sea sequence and the sed base substitutions are indicated. For hybrid promoters with the sed promoter as the backbone, the dashes represent bases identical to those in the wild-type sed sequence and the sea base substitutions are indicated.
Means ± standard deviations (in nanomoles per milligram of cell dry weight per minute). Each value represents the average of at least four determinants. Agr Δ, agr mutant.
ASI, Agr stimulation index (ratio of activity of the promoter in a wild-type host to that in an Agr deletion mutant). An asterisk indicates that results for agr mutant and agr+ hosts were significantly different.