S. aureus |
|
|
RN4220 |
rK− mK+
|
24 |
MN8 |
tstH+; clinical isolate from nonmenstrual toxic shock syndrome case |
41 |
AMD283 |
MN8 agrD
|
This study |
Plasmids |
|
|
LITMUS28 |
Cloning vector |
New England Biolabs |
pCR2.1-TOPO |
TA cloning vector |
Invitrogen |
pKEN-GFPmut2 |
gfpmut2
|
10 |
pRSET10-B |
yfp10B
|
R. Heim |
pE194 |
ermC |
19 |
pCE104 |
Shuttle vector containing pE194 and pUC18; Emr
|
33 |
pCE107 |
pCE104 containing HindIII-SalI MN8 tstH chromosomal fragment; Emr
|
P. Schlievert |
pKSV7 |
pUC18-pC194 chimera; temperature sensitive; Cmr
|
45 |
pDB1 |
PCR-amplified (O1 and O2) agr region from RN4220 cloned into XhoI-HindIII-digested LITMUS28 |
This study |
pDB2 |
BamHI-PstI gfpmut2 from pKEN cloned into BamHI-PstI-digested LITMUS28 |
This study |
pDB3 |
PCR-amplified ermC from pE194 cloned into EcoRI- and BglII-digested LITMUS28 |
This study |
pDB4 |
BglIIEcoRI ermC fragment from pDB3 cloned into BglII- and EcoRI-digested pDB2 |
This study |
pDB6 |
pUC18 containing XhoI (SalI)-HindIII agr fragment from pDB1 |
This study |
pDB9 |
pDB6 with BglII site introduced into the RNAIII region using O35, O36 |
This study |
pDB12 |
BamHI-BglII gfpmut2ermC fragment from pDB4 cloned into BglII-digested pDB9 |
This study |
pDB13 |
BamHI-HindIII agr P3-gfpmut2ermC fragment from pDB12 cloned into BamHI- and HindIII-digested pCE107 |
This study |
pDB22 |
agr P3-gfpmut2 reporter; PCR-amplified (O1 and O62) agr P3-gfpmut2ermC fragment from pDB13 cloned into BamHI-HindIII-digested pCE107 |
This study |
pDB39 |
pUC18/pC194 shuttle vector containing BamHI-BglII yfp10B fragment from pDB44 |
This study |
pDB44 |
pCR2.1-TOPO containing yfp10B PCR amplified from BamHI-digested pRSET10-B, yfp10B contains gene10 ribosome-binding site |
This study |
pDB52 |
BamHI-BglII fragment (containing ermC) of pDB3 cloned into BamHI-digested pKSV7 |
This study |
pDB53 |
agrCA fragment PCR amplified from MN8 (O63 and O68) and cloned into XbaI-digested pDB52 |
This study |
pDB59 |
PCR-amplified (O110 and O111) agr P2-P3 region from MN8 cloned into BamHI-digested pDB39; agr P3-yfp10B; Cmr
|
This study |
pDB60 |
agrB-P3 fragment PCR amplified (O112 and O113) from MN8 and cloned into BamHI- and BglII-digested pDB53 |
This study |
pDB63 |
PCR-amplified (O126 and O127) sar P1 region from MN8 cloned into BamHI-digested pDB39; Cmr
|
This study |
pJY202 |
agr P3-yfp10B reporter; pCE104 containing agr P3-yfp10BKpnI-HindIII fragment of pDB59; Emr
|
This study |
pJY209 |
sar P1-yfp10B reporter; pCE104 containing sar P1-yfp10BKpnI-HindIII fragment of pDB63; Emr
|
This study |
Primer (5′-3′) |
|
|
O1 |
TATATAAGCTTGAGCTTGGGAGGGGCTCACGACC |
|
O2 |
TATATCTCGAGAGCTTGCTCAAGCACCTCATAAGG |
|
O20 |
ATGATCGAATTCTTATTTGTACAATTCA |
|
O35 |
GCTTTTAGCATGTTTTAATATAACTAGATCTCAGAGATGTGATGGAAAATAG |
|
O36 |
CTATTTTCCATCACATCTCTGAGATCTAGTTATATTAAAACATGCTAAAAGC |
|
O62 |
ATAATGGATCCATTTTAACATAAAAAAATTTACAGTTAAG |
|
O63 |
GCACGTCTAGAGGTATACAATGAAACGTTGTATCG |
|
O68 |
ATACTCTCTAGACTATAAGAGAAAGTGTGATAG |
|
O93 |
ATGGGAAGCTTCGTGGATCCTCTAGATTTAAG |
|
O94 |
GTTCTTCTCCTTTACTCATATGTATATCTCC |
|
O97 |
CGCTGGCAGATCTTTATTATTTGTATAGTTCATCCATGCC |
|
O110 |
GGATCCACCACTCTCCTCACTGTTATTATACGA |
|
O111 |
AGATCTTTTTCCATCACATCTCTGTGATCTAGT |
|
O112 |
TAGATCTATCAAGGATGTGATGTTATGAAAGT |
|
O113 |
AGGATCCTTTTTCATAATTTAGTCCTCCTTTGAA |
|
O126 |
GGATCCGCTGATATTTTTGACTAAACCAAATG |
|
O127 |
GAGATCTCCTCCCTATTTGATGCATCTTG |
|