Table 1.
Summary of the identified somatostatin receptor sequences analyzed in this study
| Genus and species (genome assembly version) | Assigned sequence names | Chromosome/linkage group /genomic scaffold locations | |
|---|---|---|---|
| Mammals |
Homo sapiens |
Human SSTR1 |
14: 38.68 Mb |
| |
(GRCh37) |
Human SSTR2 |
17: 71.16 Mb |
| |
|
Human SSTR3 |
22: 37.60 Mb |
| |
|
Human SSTR4 |
20: 23.02 Mb |
| |
|
Human SSTR5 |
16: 1.12 Mb |
| |
Mus musculus |
Mouse SSTR1 |
12: 59.31 Mb |
| |
(NCBIM37) |
Mouse SSTR2 |
11: 113.48 Mb |
| |
|
Mouse SSTR3 |
15: 78.37 Mb |
| |
|
Mouse SSTR4 |
2: 148.22 Mb |
| |
|
Mouse SSTR5 |
17: 25.63 Mb |
| |
Canis familiaris |
Dog SSTR1 |
8: 19.58 Mb |
| |
(BROAD2) |
Dog SSTR2 |
9: 10.00 Mb |
| |
|
Dog SSTR3 |
10: 30.40 Mb |
| |
|
Dog SSTR5 |
6: 42.65 Mb |
| |
Monodelphis domestica |
Opossum SSTR1 |
1: 278.65 Mb |
| |
(BROADO5) |
Opossum SSTR2 |
2: 217.49 Mb |
| |
|
Opossum SSTR3 |
8: 91.98 Mb |
| |
|
Opossum SSTR4 |
1: 598.18 Mb |
| |
|
Opossum SSTR5 |
6: 153.47 Kb |
| Birds |
Gallus gallus |
Chicken SSTR1 |
5: 39.75 Mb |
| |
(WASHUC2) |
Chicken SSTR2 |
18: 9.00 Mb |
| |
|
Chicken SSTR3 |
1: 53.39 Mb |
| |
|
Chicken SSTR4 |
3: 3.27 Mb |
| |
|
Chicken SSTR5 |
14: 5.64 Mb |
| Reptiles |
Anolis carolinensis |
Anole lizard SSTR1 |
a |
| |
(AnoCar2.0) |
Anole lizard SSTR2 |
2: 96.75 Mb |
| |
|
Anole lizard SSTR3 |
5: 22.84 Mb |
| |
|
Anole lizard SSTR5 |
GL343263.1: 1.76 Mb |
| Amphibians |
Xenopus tropicalis |
Frog SSTR1 |
GL172781.1: 1.07 Mb |
| |
(JGI_4.2) |
Frog SSTR2 |
GL172812.1: 1.79 Mb |
| |
|
Frog SSTR3 |
GL172724.1: 1.41 Mb |
| |
|
Frog SSTR4 |
GL172884.1: 512.43 Kb |
| |
|
Frog SSTR5 |
GL172659.1: 446.17 Kb |
| Coelacanth |
Latimeria chalumnae |
Coelacanth SSTR1 |
JH126598.1: 0.53 Mb |
| |
(LatCha1) |
Coelacanth SSTR2 |
JH126581.1: 3.45 Mb |
| |
|
Coelacanth SSTR3 |
JH129649.1: 0.21 Mb |
| |
|
Coelacanth SSTR4 |
JH126648.1: 2.61 Mb |
| |
|
Coelacanth SSTR5 |
JH129247.1: 0.21 Mb |
| |
|
Coelacanth SSTR6 |
JH127490.1: 0.26 Mb |
| |
|
Coelacanth SSTRX |
JH126581.1: 3.47 Mb |
| Spotted gar |
Lepisosteus oculatus |
Spotted gar SSTR1 |
LG7: 4.44 Mb |
| |
(LepOcu1) |
Spotted gar SSTR2 |
LG10: 34.84 Mb |
| |
|
Spotted gar SSTR3 |
LG12: 34.19 Mb |
| |
|
Spotted gar SSTR5 |
LG13: 4.69 Mb |
| |
|
Spotted gar SSTR6 |
LG28: 1.08 Mb |
| Teleost fish |
Danio rerio |
Zebrafish SSTR1 |
17: 10.35 Mb |
| |
(Zv9) |
Zebrafish SSTR2a |
3: 63.08 Mb |
| |
|
Zebrafish SSTR2b |
12: 1.73 Mb |
| |
|
Zebrafish SSTR3a |
3: 29.75 Mb |
| |
|
Zebrafish SSTR3b |
Scaffold Zv9_NA631: 3.42 Kb |
| |
|
Zebrafish SSTR5a |
24: 16.78 Mb |
| |
|
Zebrafish SSTR5b |
1: 55.01 Mb |
| |
|
Zebrafish SSTR6 |
7: 19.63 Mb |
| |
Gasterosteus aculeatus |
Stickleback SSTR2a |
groupXI: 9.50 Mb |
| |
(BROADS1) |
Stickleback SSTR2b |
groupV: 6.81 Mb |
| |
|
Stickleback SSTR3a |
groupXI: 15.59 Mb |
| |
|
Stickleback SSTR5a |
groupXI: 11.72 Mb |
| |
|
Stickleback SSTR5b |
groupIX: 14.95 Mb |
| |
|
Stickleback SSTR6 |
scaffold_47: 436.21 Kb |
| |
Oryzias latipes |
Medaka SSTR2a |
8: 10.93 Mb |
| |
(MEDAKA1) |
Medaka SSTR2b |
scaffold5841: 160 bp |
| |
|
Medaka SSTR3a |
8: 2.80 Mb |
| |
|
Medaka SSTR3b |
1: 29.10 Mb |
| |
|
Medaka SSTR5a |
8: 13.75 Mb |
| |
Tetraodon nigroviridis |
Green puffer SSTR2a |
3: 10.44 Mb |
| |
(TETRAODON8) |
Green puffer SSTR2b |
2: 4.83 Mb |
| |
|
Green puffer SSTR3a |
3: 15.06 Mb |
| |
|
Green puffer SSTR3b |
18: 10.39 Mb |
| |
|
Green puffer SSTR3c |
Un_random: 59.49 Mb |
| |
|
Green puffer SSTR5b |
18: 2.40 Mb |
| |
Takifugu rubripes |
Fugu SSTR2a |
scaffold_115: 411.36 Kb |
| |
(FUGU4) |
Fugu SSTR2b |
scaffold_3: 3.77 Kb |
| |
|
Fugu SSTR3a |
scaffold_359: 200.56 Kb |
| |
|
Fugu SSTR3b |
scaffold_407: 33.36 Kb |
| |
|
Fugu SSTR5b |
scaffold_189: 267.65 Kb |
| |
|
Fugu SSTR6 |
scaffold_164: 38.74 Kb |
| Invertebrates |
Drosophila melanogaster |
Fruit fly Drostar1 |
3L: 18.55 Mb |
| (BDGP5) | Fruit fly Drostar2 | 3L: 18.48 Mb |
a The Anole lizard SSTR1 sequence could not be identified in the most updated assembly (AnoCar2.0), however it is located on genomic scaffold_0 at 284.26 Kb in the previous assembly (AnoCar1.0, Ensembl database version 60).