TABLE 2.
Putative A. hydrophila AH-1 proteins and their homologs in other bacteria
| A. hydrophila protein | Homolog (I/S)a in:
|
Putative function | |||
|---|---|---|---|---|---|
| A. salmonicida | P. luminescens | Yersinia spp. | P. aeruginosa | ||
| AscU | LscU (75/84) | YacU (69/81) | PscU (68/81) | Regulation of secretion | |
| AscT | LscT (54/63) | YscT (51/62) | Unknown | ||
| AscS | LscS (82/90) | YscS (77/89) | PscS (78/90) | Unknown | |
| AscR | LscR (78/87) | YscR (77/84) | PscR (79/87) | Unknown | |
| AscQ | LscQ (47/58) | YscQ (44/60) | PscQ (47/59) | Unknown | |
| AscP | LscP (36/53) | YscP (39/57) | PscP (34/51) | Regulation of secretion | |
| AscO | LscO (40/47) | YscO (37/53) | PscO (42/53) | Regulation of secretion | |
| AscN | AscN (NDb) | LscN (90/90) | YscN (87/90) | PscN (83/90) | ATP synthase |
| AopN | AopN (86/91) | LopN (66/78) | YopN (51/66) | PopN (59/74) | Regulation of translocation |
| Acr1 | Acr1 (90/94) | LssA (71/86) | TyeA (54/74) | Pcr1 (57/75) | Translocation apparatus |
| Acr2 | Acr2 (81/89) | LssN (63/78) | SycN (60/75) | Pcr2 (46/62) | Chaperone |
| AscX | AscX (80/89) | LssB (59/73) | YscX (50/70) | Pcr3 (46/61) | Type III secretion apparatus |
| AscY | AscY (58/62) | LssC (46/52) | YscY (37/43) | Pcr4 (46/54) | Type III secretion apparatus |
| AscV | AscV (86/88) | LssD (78/84) | LcrD (76/82) | PcrD (74/82) | Type III secretion apparatus |
| AcrR | AcrR (60/70) | LssR (51/64) | LcrR (58/74) | PcrR (47/61) | Unknown |
| AcrG | AcrG (43/56) | LssG (43/56) | LcrG (47/63) | PcrG (46/55) | Regulation of low-calcium response |
| AcrV | LssV (42/59) | LcrV (41/63) | PcrV (32/48) | Protective antigen, anti-host factor | |
| AcrH | LssH (58/69) | LcrH (61/75) | PcrH (61/73) | Chaperone | |
| AopB | LopB (36/50) | YopB (32/48) | PopB (36/51) | Translocation apparatus | |
| AopD | LopD (49/66) | YopD (45/61) | PopD (47/64) | Translocation apparatus | |
| HscY | LscY (67/80) | ExsC (56/80) | Unknown | ||
| AscW | LscW (38/58) | YscW (35/55) | ExsB (33/52) | Regulation of secretion | |
| AscA | LscA (75/82) | VirF (62/76) | ExsA (64/77) | Transcriptional activator | |
| AscZ | LscZ (41/54) | ExsD (33/51) | Unknown | ||
| AscB | LscB (54/67) | YscB (45/64) | PscB (44/60) | Unknown | |
a
I, percent identity; S, percent similarity.
b
ND, not determined due to incomplete sequence.