Table 1.
X-ray data collection and refinement statistics
Wild-type EndoV (PC) | D43A EndoV (LRC, 5-BrU peak) | |
---|---|---|
Data collection | ||
Space group | I222 | I222 |
Cell dimensions | ||
a, b, c (Å) | 55.06, 134.29, 194.45 | 51.98, 132.24, 191.62 |
α, β, γ (°) | 90.0, 90.0, 90.0 | 90.0, 90.0, 90.0 |
Resolution (Å) | 50 – 2.15 (2.23 – 2.15) * | 50 – 2.10 (2.19 – 2.10) |
Rsym (%) | 7.8 (59.1) | 5.3 (34.9) |
I / σI | 7.8 (2.6) | 69 (5.9) |
Completeness (%) | 99.2 (98.9) | 87.6 (62.0) |
Redundancy | 6.0 (5.6) | 13.3 (10.6) |
Refinement | ||
Resolution (Å) | 50 – 2.15 | 50 – 2.10 |
No. reflections | 39299 | 32087 |
Rwork / Rfree (%) | 25.9 / 28.8 | 21.6 / 25.8 |
No. atoms | ||
Protein | 3580 | 3574 |
Ligand/ion | 435 | 648 |
Water | 216 | 222 |
B-factors | ||
Protein | 44.5 | 54.7 |
Ligand/ion | 66.0 | 74.1 |
Water | 47.6 | 58.8 |
R.m.s. deviations | ||
Bond lengths (Å) | 0.006 | 0.006 |
Bond angles (°) | 1.3 | 1.3 |
Values in parentheses are for highest-resolution shell (2.23 – 2.15 and 2.19 – 2.10 respectively)