Table 5.
Genes encoding proteins involved in end-product synthesis from acetyl-CoA
|
Organism |
gene |
|||||
|---|---|---|---|---|---|---|
| pta | ack | atk | aldH | adh | adhE | |
| Standard free energy (G°’) |
9.1 |
−13.0 |
6.0 |
17.5 |
−23.7 |
−6.2 |
|
Ca. saccharolyticus DSM 8903 |
Csac_2041 |
Csac_2040 |
|
|
Csac_0407 |
|
| |
|
|
|
|
Csac_0554 |
|
| |
|
|
|
|
Csac_0622 |
|
| |
|
|
|
|
Csac_0711 |
|
| |
|
|
|
|
Csac_1500 |
|
|
Ca. bescii DSM 6725 |
Athe_1494 |
Athe_1493 |
|
|
Athe_0928 |
|
| |
|
|
|
|
Athe_0224 |
|
|
P. furiosus DSM 3638 |
|
|
PF1540 |
|
PF0075 |
|
| |
|
|
PF1787 |
|
PF0608 |
|
|
Th. kodakaraensis KOD1 |
|
|
TK0465 |
|
TK1008 |
|
| |
|
|
TK0665 |
|
TK1569 |
|
|
T. neapolitana DSM 4359 |
CTN_0945 CTN_1440 |
CTN_0411 |
|
|
CTN_0257 |
|
| |
|
|
|
|
CTN_0369 |
|
| |
|
|
|
|
CTN_0385 |
|
| |
|
|
|
|
CTN_0580 |
|
| |
|
|
|
|
CTN_1655 |
|
| |
|
|
|
|
CTN_1756 |
|
|
T. petrophila RKU-1 |
Tpet_1042 Tpet_1615 |
Tpet_0650 |
|
|
Tpet_0007 |
|
| |
|
|
|
|
Tpet_0107 |
|
| |
|
|
|
|
Tpet_0484 |
|
| |
|
|
|
|
Tpet_0508 |
|
| |
|
|
|
|
Tpet_0563 |
|
| |
|
|
|
|
Tpet_0614 |
|
| |
|
|
|
|
Tpet_0813 |
|
|
T. maritima MSB8 |
TM1130 TM1755 |
TM0274 |
|
|
TM0111 |
|
| |
|
|
|
|
TM0298 |
|
| |
|
|
|
|
TM0412 |
|
| |
|
|
|
|
TM0436 |
|
| |
|
|
|
|
TM0820 |
|
| |
|
|
|
|
TM0920 |
|
|
Cal. subterraneus subsp. tengcongensis MB4 |
TTE1482 |
TTE1481 |
|
|
TTE0313 |
|
| |
|
|
|
|
TTE0695 |
|
| |
|
|
|
|
TTE0696 |
|
| |
|
|
|
|
TTE1591 |
|
|
E. harbinense YUAN-3 T |
Ethha_2711 |
Ethha_2004 |
Ethha_1333 |
Ethha_0578 |
Ethha_0051 |
Ethha_1385 |
| |
|
|
|
Ettha_0635 |
Ethha_0580 |
|
| |
|
|
|
|
Ethha_1164 |
|
| |
|
|
|
|
Ethha_2217 |
|
| |
|
|
|
|
Ethha_2239 |
|
|
C. cellulolyticum H10 |
Ccel_2137 |
Ccel_2136 |
Ccel_0494 Ccel_1469 |
|
Ccel_0894 |
Ccel_3198 |
| |
|
|
|
|
Ccel_1083 |
|
| |
|
|
|
|
Ccel_3337 |
|
|
C. phytofermentans ISDg |
Cphy_1326 |
Cphy_132 |
|
Cphy_0958 |
Cphy_1029 |
Cphy_3925 |
| |
|
|
|
Cphy_1178 |
Cphy_1421 |
|
| |
|
|
|
Cphy_1416 |
Cphy_2463 |
|
| |
|
|
|
Cphy_1428 |
Cphy_2463 |
|
| |
|
|
|
Cphy_2418 |
|
|
| |
|
|
|
Cphy_2642 |
|
|
| |
|
|
|
Cphy_3041 |
|
|
|
C. thermocellum ATCC 27405 |
Cthe_1029 |
Cthe_1028 |
Cthe_0551 |
Cthe_2238 |
Cthe_0101 |
Cthe_0423 |
| |
|
|
|
|
Cthe_0394 |
|
| |
|
|
|
|
Cthe_2579 |
|
|
C. thermocellum DSM 4150 |
CtherDRAFT_2741 |
CtherDRAFT_2742 |
CtherDRAFT_2349 |
CtherDRAFT_1042 |
CtherDRAFT_0189 |
CtherDRAFT_1096 |
| |
|
|
|
|
CtherDRAFT_0616 |
|
| |
|
|
|
|
CtherDRAFT_2833 |
|
|
Ta. pseudethanolicus 39E |
Teth39_1296 |
Teth39_1295 |
|
|
Teth39_0220 |
Teth39_0206 |
| |
|
|
|
|
Teth39_1597 |
|
| |
|
|
|
|
Teth39_1979 |
|
|
G. thermoglucosidasius C56-YS93 |
Cthe_3862 |
Geoth_0875 |
Geoth_0855 |
Geoth_0268 |
Geoth_1572 |
Geoth_3879 |
| |
|
|
Geoth_0879 |
Geoth_0652 |
Geoth_1941 |
|
| |
|
|
Geoth_2349 |
Geoth_3494 |
Geoth_0631 |
|
|
B. cereus ATCC 14579 |
BC5387 |
BC4637 |
|
BC2832 |
BC0802 |
BC4365 |
| |
|
|
|
BC3555 |
BC2529 |
|
| BC1285 | BC2220 | |||||
Abbreviations: pta, phosphotransacetylase; ack, acetate kinase; atk, acetate thiokinase; aldH, acetaldehyde dehydrogenase; adh, alcohol dehydrogenase; adhE; bifunctional acetylaldehyde/alcohol dehydrogenase.