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. 2013 Jan 31;8(1):e55480. doi: 10.1371/journal.pone.0055480

Table 1. Pairwise nucleotide and amino acid sequence identities between human enterovirus 85 strains and prototype strains of the HEV-B species.

Region Nucleotide identity (%) [Amino acid identity (%) ]
HT-LYKH202F HTYT-ARL-AFP02F HTYT-ARLH403F HTPS-MJH21F HTPS-MKLH04F
Prototype of HEV85 Prototypes of other HEV-B Prototype of HEV85 Prototypes of other HEV-B Prototype of HEV85 Prototypes of other HEV-B Prototype of HEV85 Prototypes of other HEV-B Prototype of HEV85 Prototypes of other HEV-B
5′-UTR 91.5 79.6–88.4 91.3 79.4–88.3 91.2 79.5–88.2 91.3 79.3–88.3 91.2 79.2–88.2
VP4 89.3 (100) 69.0–81.1 (75.3–95.6) 89.8 (100) 68.5–81.1 (75.3–95.6) 89.8 (98.5) 68.5–81.1 (75.3–94.2) 89.8 (100) 69.0–81.6(75.3–95.6) 90.3 (100) 69.0–80.6 (75.3–95.6)
VP2 89.5 (98.8) 64.9–72.5 (75.5–83.2) 89.2 (98.4) 64.9–72.2 (75.5–83.2) 89.6 (98.8) 64.5–72.2 (75.5–83.2) 89.1 (98.8) 65.0–72.9 (75.5–83.5) 89.6 (98.4) 64.9–72.4 (75.5–83.2)
VP3 90.0 (98.7) 63.1–71.0 (66.9–81.9) 89.9 (98.7) 63.1–71.1 (66.9–81.9) 88.9 (99.1) 63.2–70.4 (66.9–81.9) 89.3 (98.7) 62.8–70.7 (66.9–81.5) 89.9 (99.1) 63.1–70.7 (66.9–81.9)
VP1 89.4 (98.9) 55.5–69.8 (57.3–75.6) 89.4 (98.6) 55.9–69.7 (57.3–75.2) 89.1 (98.6) 55.6–69.0 (57.0–75.6) 89.0 (97.9) 55.5–69.7 (57.0–75.2) 89.6 (98.9) 55.6–69.1 (57.3–75.6)
2A 79.3 (94.6) 75.1–81.7 (84.6–96.0) 79.5 (94.6) 74.8–81.5 (84.6–96.0) 79.7 (94.6) 75.3–81.1 (84.6–96.0) 80.2 (95.3) 74.8–81.5 (85.3–96.6) 80.0 (94.6) 75.5–81.7 (84.6–96.0)
2B 80.1 (94.9) 75.7–83.8 (93.9–98.9) 80.4 (94.9) 75.0–83.5 (93.9–98.9) 80.1 (94.9) 75.0–83.5 (93.9–98.9) 80.8 (94.9) 76.0–83.1 (93.9–98.9) 79.4 (94.9) 75.0–83.1 (93.9–98.9)
2C 83.8 (98.4) 79.2–84.9 (96.3–99.0) 84.3 (98.7) 79.4–84.9 (96.6–99.3) 84.1 (99.0) 79.5–85.2 (96.9–99.6) 84.3 (98.7) 79.6–85.1 (96.6–99.3) 84.0 (97.8) 79.1–84.7 (85.7–99.0)
3A 80.1 (97.7) 75.6–85.3 (91.0–98.8) 80.5 (97.7) 76.0–85.7 (91.0–98.8) 80.5 (97.7) 76.0–85.7 (91.0–98.8) 79.4 (97.7) 74.9–84.6 (91.0–98.8) 80.1 (97.7) 75.6–85.3 (91.0–98.8)
3B 84.8 (100) 69.6–87.8 (90.9–100) 87.8 (100) 72.7–87.8 (90.9–100) 87.8 (100) 72.7–87.8 (90.9–100) 86.3 (100) 71.2–89.3 (90.9–100) 86.3 (100) 71.2–89.3 (90.9–100)
3C 83.9 (98.9) 75.9–85.7 (92.8–99.4) 83.7 (98.3) 75.9–85.6 (92.3–98.9) 83.9 (98.9) 76.1–85.7 (92.8–99.4) 84.3 (98.9) 76.1–86.1 (92.8–99.4) 84.1 (98.9) 75.7–85.4 (92.8–99.4)
3D 84.9 (97.6) 77.5–85.6 (95.0–98.2) 85.5 (98.0) 78.1–86.1 (95.4–98.8) 85.4 (97.8) 77.8–86.2 (95.2–98.4) 85.1 (97.8) 77.7–85.7 (95.2–98.4) 85.6 (98.0) 77.9–86.0 (95.4–98.7)
3′-UTR 87.5 74.0–91.3 87.5 75.0–91.3 88.4 74.0–92.3 87.5 73.0–91.3 88.4 74.0–92.3