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. 2013 Jan 31;8(1):e55480. doi: 10.1371/journal.pone.0055480

Table 3. PCR and sequencing primers.

Primer Nucleotide position (nt) Primer sequence (5′–3′) Orientation Reference
0001S48 GGGGACAAGTTTGTACAAAAAAGCAGGCTTTAAAACAGCTCTGGGGTT Forward [43]
HEV85-1049A 1030–1049 ACAACAACATTGGCACACTC Reverse This study
HEV85-636S 636–655 GCCATCCGGTGTCAAATAGA Forward This study
HEV85-1656A 1637–1656 AGCCTGATCCGTGTAGTCCA Reverse This study
HEV85-1487S 1487–1506 TGGGCAACCTAACGATCTTC Forward This study
HEV85-2640A 2611–2640 GACTCTGAGCGGGAATGGTA Reverse This study
HEV85-2480S 2461–2480 GAAGGGAGAGCGAGCCTAGT Forward This study
HEV85-3406A 3406–3425 TAGTCCTCCCAGACGCAACT Reverse This study
HEV85-3290S 3268–3287 CGTGCCACCATTAACACAGT Forward This study
HEV85-4257A 4238–4257 TTCAATGGTGGCAATCTGAC Reverse This study
HEV85-4072S 4072–4091 GGCTGGCTCAAGAAGTTCAC Forward This study
HEV85-5062A 5043–5062 CTGGTGGACCTTGGAAAAGA Reverse This study
HEV85-4930S 4930–4949 GCCATCCAGTTCATTGACAG Forward This study
HEV85-5880A 5861–5880 GTTGCCACCAACGTGTATTC Reverse This study
HEV85-5722S 5722–5741 TACATCCCCGTTGGTCAAGT Forward This study
HEV85-6619A 6600–6619 GATGGCCGTCAAGCATAACT Reverse This study
HEV85-6436S 6436–6455 GTGGCTAAAGGCAAGTCCAG Forward This study
HEV85-7260A 7241–7260 TACTGGGACGCTCCTGATCT Reverse This study
HEV85-7084S 7084–7103 CAATACCCCTTCCTCGTTCA Forward This study
7500A GGGGACCACTTTGTACAAGAAAGCTGGG(T)24 Reverse [43]