Table 3. Top 20 GSEA - Cancer Modules for differentially expressed genes in HeLa cells treated with Cas II-Gly.
Module | FDR corrected p-val | Relevant features |
MODULE_235 | 0.006254237 | Phase II conjugation - metabolic detoxification |
MODULE_164 | 0.003127119 | p53 signaling pathway, |
MODULE_6 | 0.007922776 | Cell adhesion, functionalization of compounds |
MODULE_247 | 0.020577544 | Genes involved in Biological oxidations |
MODULE_488 | 0.020014847 | Cell Cycle: G1/S Check Point, local acute inflammatory response |
MODULE_263 | 0.018957132 | NOD-like receptor signaling pathway (NF-KB related) |
MODULE_108 | 0.022294335 | Selective expression of chemokine receptors during T-cell polarization |
MODULE_178 | 0.028853938 | Genes involved in PI-3K cascade |
MODULE_362 | 0.026101848 | Genes involved in Signaling by VEGF |
MODULE_444 | 0.028056284 | Genes involved in SHC-mediated cascade, regulation of cell adhesion |
MODULE_14 | 0.026060386 | Cytokine Network |
MODULE_29 | 0.02646123 | GTP hydrolysis |
MODULE_516 | 0.025891503 | Regulation of cell adhesion |
MODULE_83 | 0.026049469 | Cytochrome c oxidase activity |
MODULE_76 | 0.02518265 | Toll-like receptor signaling pathway, NOD-like receptor signaling pathway |
MODULE_462 | 0.02532188 | Genes involved in Biological oxidations, Phase II conjugation - metabolic detoxification |
MODULE_151 | 0.02696601 | Oxidoreductase activity, mitochondrial membrane, cytochrome c oxidase activity |
MODULE_355 | 0.025467897 | Stress Induction of HSP Regulation, p38 MAPK Signaling Pathway |
MODULE_93 | 0.02453315 | Oxidoreductase activity, metal ion transporter activity, glutathione peroxidase activity |
MODULE_5 | 0.032609396 | Response to stress, inflammatory response, protein kinase activity |
Statistical significance was assessed by hypergeometric tests, corrected with the false discovery rate (FDR) algorithm.