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. 2013 Jan 31;8(1):e54664. doi: 10.1371/journal.pone.0054664

Table 3. Top 20 GSEA - Cancer Modules for differentially expressed genes in HeLa cells treated with Cas II-Gly.

Module FDR corrected p-val Relevant features
MODULE_235 0.006254237 Phase II conjugation - metabolic detoxification
MODULE_164 0.003127119 p53 signaling pathway,
MODULE_6 0.007922776 Cell adhesion, functionalization of compounds
MODULE_247 0.020577544 Genes involved in Biological oxidations
MODULE_488 0.020014847 Cell Cycle: G1/S Check Point, local acute inflammatory response
MODULE_263 0.018957132 NOD-like receptor signaling pathway (NF-KB related)
MODULE_108 0.022294335 Selective expression of chemokine receptors during T-cell polarization
MODULE_178 0.028853938 Genes involved in PI-3K cascade
MODULE_362 0.026101848 Genes involved in Signaling by VEGF
MODULE_444 0.028056284 Genes involved in SHC-mediated cascade, regulation of cell adhesion
MODULE_14 0.026060386 Cytokine Network
MODULE_29 0.02646123 GTP hydrolysis
MODULE_516 0.025891503 Regulation of cell adhesion
MODULE_83 0.026049469 Cytochrome c oxidase activity
MODULE_76 0.02518265 Toll-like receptor signaling pathway, NOD-like receptor signaling pathway
MODULE_462 0.02532188 Genes involved in Biological oxidations, Phase II conjugation - metabolic detoxification
MODULE_151 0.02696601 Oxidoreductase activity, mitochondrial membrane, cytochrome c oxidase activity
MODULE_355 0.025467897 Stress Induction of HSP Regulation, p38 MAPK Signaling Pathway
MODULE_93 0.02453315 Oxidoreductase activity, metal ion transporter activity, glutathione peroxidase activity
MODULE_5 0.032609396 Response to stress, inflammatory response, protein kinase activity

Statistical significance was assessed by hypergeometric tests, corrected with the false discovery rate (FDR) algorithm.