Table 2.
First Author | PubMed ID | Trait/Disease | Initial Sample Size |
Replication Sample Size |
Region | Reported Gene(s) | Strongest SNP-Risk Allele | Risk Allele Frequency in Controls |
P-value | Odds ratio or beta-coefficient and [95% CI] |
---|---|---|---|---|---|---|---|---|---|---|
Newton-Cheh | 19430483 | Diastolic BP | 34,433 | 100,347 Europeans, | 15q24.1 | CYP1A1, CYP1A2, CSK, LMAN1L, CPLX3, ARID3B | rs1378942-C | 0.36 | 1 × 10−23 | 0.43 [0.35–0.51] mm Hg increase |
12,889 Indian Asian | 4q21.21 | FGF5, PRDM8, c4orf22 | rs16998073-T | 0.21 | 1 × 10−21 | 0.5 [0.40–0.60] mm Hg increase | ||||
12q24.12 | ATXN2, SH2B3 | rs653178-T | 0.53 | 3 × 10−18 | 0.46 [0.36–0.56] mm Hg decrease | |||||
10q21.2 | c10orf107, TMEM26, RTKN2, RHOBTB1, ARID5B | rs1530440-T | 0.19 | 1 × 10−9 | 0.39 [0.27–0.51] mm Hg decrease | |||||
17q21.32 | ZNF652, PHB | rs16948048-G | 0.39 | 5 × 10−9 | 0.31 [0.21–0.41] mm Hg increase | |||||
3q26.2 | MDS1 | rs1918974-T | 0.54 | 8 × 10−8 | 0.27 [0.17–0.37] mm Hg decrease | |||||
Systolic BP | 34,433 | 100,347 Europeans | 10q24.32 | CYP17A1, AS3MT, CNNM2, NT5C2 | rs11191548-T | 0.91 | 7 × 10−24 | 1.16 [0.92–1.40] mm Hg increase | ||
12,889 Indian Asian | 1p36.22 | MTHFR, NPPA, CLCN6, NPPB, AGTRAP | rs17367504-G | 0.14 | 2 × 10−13 | 0.85 [0.63–1.07] mm Hg decrease | ||||
17q21.31 | PLCD3, ACBD4, HEXIM1, HEXIM2 | rs12946454-T | 0.28 | 1 × 10−8 | 0.57 [0.37–0.77] mm Hg increase | |||||
Levy | 19430479 | Diastolic BP | 29,136 | 34,433 | 12q24.12 | SH2B3 | rs3184504-T | 0.48 | 3 × 10−14 | 0.48 [0.36–0.60] mm Hg increase |
15q24.1 | CSK, ULK3 | rs6495122-A | 0.42 | 2 × 10−10 | 0.4 [0.28–0.52] mm Hg increase | |||||
12q21.33 | ATP2B1 | rs2681472-A | 0.83 | 1 × 10−9 | 0.5 [0.34–0.66] mm Hg increase | |||||
3p22.1 | ULK4 | rs9815354-A | 0.17 | 3 × 10−9 | 0.49 [0.33–0.65] mm Hg increase | |||||
10p12.33 | CACNB2 | rs11014166-A | 0.66 | 1 × 10−8 | 0.37 [0.25–0.49] mm Hg increase | |||||
12q24.21 | TBX3, TBX5 | rs2384550-A | 0.35 | 4 × 10−8 | 0.35 [0.23–0.47] mm Hg decrease | |||||
11p15.1 | PLEKHA7 | rs11024074-T | 0.72 | 1 × 10−6 | 0.33 [0.19–0.47] mm Hg decrease | |||||
Systolic BP | 29,136 | 34,433 | 12q21.33 | ATP2B1 | rs2681492-T | 0.8 | 4 × 10−11 | 0.85 [0.60–1.10] mm Hg increase | ||
10q24.32 | CYP17A1 | rs1004467-A | 0.9 | 1 × 10−10 | 1.05 [0.74–1.36] mm Hg increase | |||||
11p15.1 | PLEKHA7 | rs381815-T | 0.26 | 2 × 10−9 | 0.65 [0.43–0.87] mm Hg increase | |||||
12q24.12 | SH2B3 | rs3184504-T | 0.48 | 5 × 10−9 | 0.58 [0.38–0.78] mm Hg increase | |||||
3q26.2 | MDS1 | rs448378-A | 0.52 | 1 × 10−7 | 0.51 [0.31–0.71] mm Hg decrease | |||||
10p12.33 | CACNB2 | rs11014166-A | 0.66 | 7 × 10−7 | 0.5 [0.30–0.70] mm Hg increase | |||||
1p36.22 | CASZ1 | rs12046278-T | 0.64 | 5 × 10−6 | 0.53 [0.29–0.77] mm Hg decrease | |||||
Hypertension | 29,136 | 34,433 | 12q21.33 | ATP2B1 | rs2681472-A | 0.83 | 2 × 10−11 | 0.15 [0.11–0.19] increase in log odds | ||
10p12.33 | CACNB2 | rs11014166-A | 0.66 | 6 × 10−8 | 0.09 [0.05–0.13] increase in log odds | |||||
20q13.32 | ZNF831, EDN3 | rs16982520-A | 0.88 | 2 × 10−7 | 0.13 [0.09–0.17] decrease in log odds | |||||
8p23.1 | MSRA | rs11775334-A | 0.32 | 4 × 10−6 | 0.08 [0.04–0.12] increase in log odds |