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. Author manuscript; available in PMC: 2013 Feb 4.
Published in final edited form as: J Mol Biol. 2005 Dec 5;356(3):638–650. doi: 10.1016/j.jmb.2005.11.055

Table 1.

Curve fitting results for [Cd] CadA NTKII EXAFS

Sample filename (k range) Δk3χ Fit Shell Ras (Å)
σas2(2)
ΔE0 (eV) f′a BVSb
CdNTK
DNK0 (2–13 Å−1)
Δk3χ=8.70
1 Cd–S3 2.49 0.0054 −11.97 0.129 1.81
2 Cd–S4 2.49 0.0071 −10.51 0.112 2.42
3 Cd–S3 2.51 0.0054 −7.82 0.111 2.10
Cd–O1 2.26 0.0023
4 Cd–S2 2.54 0.0035 −4.74 0.111 1.76
Cd–O2 2.29 0.0028
CdNTK + TCEP
DNKP (2–13 Å−1)
Δk3χ=8.02
5 Cd–S3 2.50 0.0048 −8.00 0.093 1.77
6 Cd–S4 2.50 0.0065 −8.34 0.085 2.36
7 Cd–S3 2.51 0.0048 −7.36 0.085 2.12
Cd–O1 2.24 0.0062
8 Cd–S2 2.53 0.0032 −3.50 0.087 1.79
Cd–O2 2.29 0.0045
9 Cd–S3 2.51 0.0046 −7.07 0.077 2.12
Cd–O1 2.24 0.0064
Cd–Cd 3.66 0.0059

Shell is the chemical unit defined for the multiple scattering calculation. Subscripts denote the number of scatterers per metal-ion. Ras is the metal-scatterer distance. σas2 is a mean-square deviation in Ras. ΔE0 is the shift in E0 for the theoretical scattering functions.

a
f′ is a normalized error (chi-squared):
f={i[k3(χiobs-χicalc)]/N}1/2[(k3χobs)max-(k3χobs)min]
b

BVS = Σexp[roRas], B=0.37, r0(Cd(II)–S)=2.304, r0(Cd(II)–O)=1.904.57