Table 2.
CPU times for clustering artificial community
Function | CPU time (seconds) |
---|---|
ESPRIT |
|
kmerdist |
74.80 |
needledist |
924.68 |
Total |
1002.68 |
DADA |
|
N-W alignments |
97.81 |
read p-values |
58.84 |
Total |
296.64 |
ESPRIT+DADA |
1.30×103 |
AmpliconNoise | 7.57×104 |
The CPU times for a few significant subroutines within DADA and ESPRIT as well as their total CPU times.