Table 4.
Evaluation metrics for S. aureus dataset
| Evaluation metrics (S. aureus) | |||||
|---|---|---|---|---|---|
|
Tiling Signal |
Metric |
PMSW |
SCM |
ZCL |
ZCLSure |
| WT Forward |
PPV |
0.6298 |
0.6498 |
0.6248 |
0.6407 |
| WT Forward |
Sens |
0.8657 |
0.8766 |
0.8715 |
0.8719 |
| WT Reverse |
PPV |
0.6867 |
0.6993 |
0.7050 |
0.6989 |
| WT Reverse |
Sens |
0.8506 |
0.8560 |
0.8388 |
0.8535 |
|
ΔsigB Forward |
PPV |
0.6238 |
0.6388 |
0.6227 |
0.6308 |
|
ΔsigB Forward |
Sens |
0.9054 |
0.9035 |
0.9027 |
0.9036 |
|
ΔsigB Reverse |
PPV |
0.6664 |
0.6815 |
0.6765 |
0.6748 |
| ΔsigB Reverse | Sens | 0.8697 | 0.8684 | 0.8667 | 0.8515 |
Mean number of detected TARs, probe-level PPV, probe-level sensitivity and computational time for PMSW, SCM and ZCL methods.