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. 2012 Oct 25;14(1):19–34. doi: 10.1038/gene.2012.49

Table 1. Functions significantly associated with differentially regulated immune response genes that passed Welch's t-test and FDR correction (q<0.05) and showed >1.3-fold change in post-RASP leukocytes compared with pre-RASP leukocytes.

GO-ID Function   Gene symbol
Functions of downregulated immune response genes
 45321 Leukocyte activation MICA, CD8A, CD8B, ELF4, TLR4, ADA, CD74, CD93, CD2, FCER1G, CD4, SYK, IL4, KLF6, PTPRC, CD3D, IL8, CD3E, RELB, SLAMF7, CD40, LAT, LCK, CD79A, LCP2
 6954 Inflammatory response CXCL1, ITGAL, TNF, TLR2, NFKB1, ITGB2, TLR4, CCL5, CD97, CCL20, KRT1, IL1B, IL1A, CEBPB, IL8, IL1RN, GRO3, CD40, CCL18, CD180, C8G, SCYA7, CCL13, CCR7, CYBB, CCR5, CRH, CD14
 19882 Antigen processing and presentation HLA-DQB1, MICA, CD8A, HLA-DRB1, RELB, HLA-C, FCGRT, HLA-B, HLA-G, CD74, B2M, FCER1G, HLA-DPA1, HLA-DPB1, HLA-DOB, AP3B1, HLA-DRA
 46649 Lymphocyte activation IL4, PTPRC, KLF6, MICA, CD3D, CD8A, ELF4, CD3E, CD8B, RELB, CD40, SLAMF7, CD74, ADA, LCK, CD2, CD4, CD79A, SYK
 30097 Hemopoiesis IL4, PTPRC, KLF6, CD3D, LYN, HCLS1, RELB, IFI16, MYH9, CD164, CD74, LCK, CD4, SPIB, CD79A, MYST1, SYK, MYST3
 52033 Pathogen-associated molecular pattern recognition PF4, CHIT1, TLR2, TLR4, SCYA7, CD14, PF4V1, CLP1, TICAM1, FPRL1, FPR1
 6935 Chemotaxis IL4, CXCL1, C5AR1, IL8, GRO3, ITGB2, PF4, CCL5, CCL18, SCYB5, SCYA7, CCL13, CCR7, CCR5, PPBP, CCL20, IL1B, FCER1G, SYK
 42110 T-cell activation PTPRC, MICA, CD3D, CD8A, CD3E, CD8B, ELF4, RELB, CD74, ADA, LCK, CD2, CD4, SYK
 2274 Myeloid leukocyte activation LAT, IL8, CD93, RELB, FCER1G, TLR4, LCP2
 50778 Positive regulation of immune response PTPRC, MICA, SLK, FYN, KRT1, TLR2, FCER1G, CD79A, C8G, SYK
 6959 Humoral immune response PSMB10, CD83, ST6GAL1, TNF, HLXB9, POU2F2, KRT1, AIRE, C8G
 1934 Positive regulation of phosphorylation TNF, CCND3, LYN, HCLS1, IL1B, CD4, SYK
 45087 Innate immune response CYBB, IL1R1, SARM1, CLP1, KRT1, TLR2, TLR4, SLAMF7, CD180, C8G
 2252 Immune effector process PTPRC, LAT, MICA, FCN2, KRT1, FCER1G, SLAMF7, CD74, C8G
 30593 Neutrophil chemotaxis IL8, FCER1G, IL1B, ITGB2, SYK
 7229 Integrin signaling LAT, ITGAL, ITGAX, ITGB2, MYH9, ITGAM, SYK
 45058 T-cell selection CD3D, CD4, CD74, SYK
 1816 Cytokine production IL4, CD4, ISGF3G, CD226, LCP2
 6909 Phagocytosis CD93, FCN2, CLP1, FCER1G, CD14
 2460 Somatic recombination for adaptive response IL4, RELB, FCER1G, TLR4, CD74, C8G
     
Functions associated with upregulated immune response genes
 48545 Response to steroid hormones CEBPA, CAV1, HMGB2, PRKACA, CD24
 42326 Negative regulation of phosphorylation CAV1, PRKACA, INHA
 6956 Complement activation C4B, C3, C2
 10817 Regulation of hormone levels DHRS2, ACE, FKBP1B
 43434 Response to peptide hormones HHEX, PRKDC, PRKACA
 2762 Negative regulation of myeloid leukocyte differentiation FSTL3, INHA
 32088 Negative regulation of NFκB activity POP1, SIVA
 51384 Response to glucocorticoids CEBPA, CAV1, PRKACA
 16481 Negative regulation of transcription CEBPA, HHEX, CAV1, HMGB2, FST, HELLS