Table 3.
GC-content of nucleotide sequences corresponding to the trimmed orthologous protein set
|
Species |
GC (%) |
GC enrichment relative to mean |
GC total (%) |
||||
|---|---|---|---|---|---|---|---|
| #1 | #2 | #3 | #1 | #2 | #3 | ||
|
H. sapiens |
56.23 |
38.06 |
54.67 |
1.05 |
1.02 |
1.09 |
49.65 |
|
S. cerevisiae |
46.54 |
35.51 |
38.25 |
0.87 |
0.95 |
0.76 |
40.1 |
|
C. elegans |
54.83 |
37.63 |
42.69 |
1.03 |
1.01 |
0.85 |
45.05 |
|
C. teleta |
54.46 |
37.32 |
55.46 |
1.02 |
1 |
1.11 |
49.08 |
|
H. robusta |
49.2 |
35.62 |
46.4 |
0.92 |
0.96 |
0.93 |
43.74 |
|
D. melanogaster |
56.98 |
37.57 |
69.85 |
1.07 |
1.01 |
1.39 |
54.8 |
|
A. pompejana |
52.2 |
36.42 |
41.08 |
0.98 |
0.98 |
0.82 |
43.23 |
|
C. thermophilum |
59.75 |
41.02 |
70.83 |
1.12 |
1.1 |
1.41 |
57.2 |
|
D. rerio |
55.62 |
37.68 |
57.52 |
1.04 |
1.01 |
1.15 |
50.27 |
|
L. gigantea |
47.59 |
35.77 |
24.82 |
0.89 |
0.96 |
0.49 |
36.06 |
| mean | 53.34 | 37.26 | 50.16 | 46.919 | |||
GC-content (total and at different codon positions) in the orthologous set and GC-content enrichment, relative to the mean of each species studied at each position.