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. 2013 Jan 16;8:2. doi: 10.1186/1745-6150-8-2

Table 4.

Correlation of CvP-bias differences with experimentally determined Tm value differences for various orthologous protein pairs

Protein   Thermophilic (A. pompejana or C. thermophilum) Mesophilic (human,S. cerevisiaeorT. reesei) Difference
Rrp4 (A. pompejana vs. human)
CvP-bias
0.408
6.122
5.714
 
Tm
38°C
43.1°C
5.1
Pol η (A. pompejana vs. human)
CvP-bias
5.71
3.67
−2.04
 
Tm
49°C
43°C
−6
Collagen (A. pompejana vs. human)
CvP-bias
8.696
5.804
−2.892
 
Tm
45-46°C
38-42°C
−3 to −8
U2AF65 (A. pompejana vs. human)
CvP-bias
11.90
5.68
−6.22
 
Tm
47°C
43°C
−4
Nup170 (C. thermophilum vs. S. cerevisiae)
CvP-bias
−1.13
−4.86
−3.73
 
Tm
57°C
36°C
−21
Nup192 (C. thermophilum vs. S. cerevisiae)
CvP-bias
3.47
−3.33
−6.8
 
Tm
57°C
36°C
−21
Xylanase (C. thermophilum vs. Trichoderma reesei)
CvP-bias
−20.276
−22.523
−2.24
  Tm 60°C 50°C −10

Validation of CvP-bias with experimentally determined thermal stabilities for orthologous protein pairs from refs. [8,30].