Table 1. Descriptions of SILs.
| Figure Code | Introgression Name | Introgressed Locus | Introgressed/ Background Species | Starting Cluster | Starting Marker | Ending Cluster | End Marker | Introgression Size, bp | Locus Citation |
|---|---|---|---|---|---|---|---|---|---|
| a | SIL02_ant_gV | antennapedia mutant | g/V | 1.004 | SCAFFOLD_16_695042_695121 | 1.026 | SCAFFOLD_16_3632344_3632423 | 3006600 | (Werren and Perrot-Minnot 1999) |
| b | SIL03_rdh5_gV | rdh5 eye color | g/V | 1.061 | SCAFFOLD_33_665868_665947 | 1.063 | SCAFFOLD_1_631906_631985 | 1928226.5 | (Saul 1990) |
| c | SIL04_b3u_gV | wdw wing QTL | g/V | 1.096 | SCAFFOLD_1_4594963_4595042 | 1.107 | SCAFFOLD_7_7419_7498 | 1651579 | (Loehlin and Werren 2012) |
| d | SIL05_d1_gV | wdw wing QTL | g/V | 1.091 | SCAFFOLD_1_3613637_3613716 | 1.106 | SCAFFOLD_7_24252_24331 | 2610217 | (Loehlin and Werren 2012) |
| e | SIL06_hsb3u_gV | wdw wing QTL | g/V | 1.096 | SCAFFOLD_1_4594963_4595042 | 1.107 | SCAFFOLD_7_7419_7498 | 1651579 | (Loehlin and Werren 2012) |
| f | SIL07_wdw_vG | wdw wing QTL | v/G | 1.072 | SCAFFOLD_1_1849534_1849613 | 1.102 | SCAFFOLD_1_5660392_5660471 | 3823298.5 | (Loehlin and Werren 2012) |
| g | SIL08_st318_gV | st-318 eye color | g/V | 3.043 | SCAFFOLD_89_601954_602033 | 3.077 | SCAFFOLD_17_1447204_1447283 | 24316119.5 | (Saul 1990) |
| h | SIL09_stmm_gV | st-318,mm head shape | g/V | 3.056 | SCAFFOLD_22_1563155_1563234 | 3.087 | SCAFFOLD_17_2553865_2553944 | 3239862.5 | (Saul 1990) |
| i | SIL10_bk424_gV | bk424 eye color | g/V | 4.000 | SCAFFOLD_4_5206596_5206675 | 4.007 | SCAFFOLD_4_3692382_3692461 | 1585134.5 | (Saul 1990) |
| j | SIL11_mrp901_gV | mitochondrial riboprotein 901 molecular marker | g/V | 4.016 | SCAFFOLD_4_3019664_3019743 | 4.028 | SCAFFOLD_4_1505972_1506051 | 1519922.5 | J. H. Werren, unpublished data |
| k | SIL12_wbr055_gV | ws1 wing QTL | g/V | 4.036 | SCAFFOLD_4_325612_325691 | 4.051 | SCAFFOLD_23_136201_136280 | 2631402 | (Loehlin et al. 2010b) |
| l | SIL13_w1.1_gV | ws1 wing QTL | g/V | 4.037 | SCAFFOLD_4_290478_290557 | 4.051 | SCAFFOLD_29_160960_161039 | 2898380.5 | (Loehlin et al. 2010b) |
| m | SIL14_bkbw_gV | ws1 wing QTL | g/V | 4.047 | SCAFFOLD_23_1874450_1874529 | 4.051 | SCAFFOLD_29_160960_161039 | 2069456 | (Desjardins et al. 2010) |
| 4.056 | SCAFFOLD_17_431985_432064 | 4.069 | SCAFFOLD_40_1771694_1771773 | 21850167.5 | |||||
| n | SIL15_ws1_844_gV | ws1 wing QTL | g/V | 4.047 | SCAFFOLD_23_1874450_1874529 | 4.051 | SCAFFOLD_29_160960_161039 | 2069456 | (Loehlin et al. 2010b) |
| 4.056 | SCAFFOLD_17_431985_432064 | 4.062 | SCAFFOLD_66_570309_570388 | 5341440.5 | |||||
| o | SIL16_ws1_vG | ws1 wing QTL | g/V | 4.056 | SCAFFOLD_23_1661132_1661211 | 4.055 | SCAFFOLD_35_1537323_1537402 | 8091567 | (Loehlin et al. 2010b) |
| p | SIL17_ws1_lV | ws1 wing QTL | g/V | 4.051 | SCAFFOLD_23_562542_562621 | 4.063 | SCAFFOLD_66_570309_570388 | 12358488 | (Loehlin et al. 2010b) |
| q | SIL18_s6k_gV | s6 kinase molecular marker | g/V | 4.057 | SCAFFOLD_17_317904_317983 | 4.061 | SCAFFOLD_51_686510_686589 | 4328932 | J. H. Werren, unpublished data |
| r | SIL19_sww845_gV | shorter wider wing QTL | g/V | 4.064 | SCAFFOLD_66_364114_364193 | 4.068 | SCAFFOLD_40_1838710_1838789 | 16310977 | J. H. Werren, unpublished data |
| s | SIL20_sww_gV | shorter wider wing QTL | g/V | 4.065 | SCAFFOLD_43_100411_100490 | 4.071 | SCAFFOLD_40_1699997_1700076 | 15969580.5 | J. H. Werren, unpublished data |
| t | SIL21_ws2_gV | ws2 wing QTL | g/V | 4.087 | SCAFFOLD_9_3481449_3481528 | 4.103 | SCAFFOLD_9_42054_42133 | 3498562 | J. H. Werren, unpublished data |
| u | SIL22_nadhR | NADH-ubiquitin molecular marker | g/V | 5.000 | SCAFFOLD_14_23509_23588 | 5.001 | SCAFFOLD_14_627130_627209 | 637381.5 | J. H. Werren, unpublished data |
| v | SIL23_atpd4_gV | Atpase-6 molecular marker | g/V | 5.003 | SCAFFOLD_14_1325752_1325831 | 5.015 | SCAFFOLD_38_1386740_1386819 | 2548446.5 | J. H. Werren, unpublished data |
| w | SIL24_PePu_GDgV | peach eye, purple body, grounded (tiny wing) | g/V | 5.008 | SCAFFOLD_14_2690831_2690910 | 5.017 | SCAFFOLD_7_3061899_3061978 | 3542691.5 | (Saul 1990; Werren et al. 2010) |
| x | SIL25_pegpugVgd | peach eye, purple body | g/V | 5.028 | SCAFFOLD_7_1286368_1286447 | 5.044 | SCAFFOLD_2085_9762_9841 | 12894737.5 | (Saul 1990; Werren et al. 2010) |
| y | SIL26_stdr109_gV | st-DR eye color | g/V | 5.041 | SCAFFOLD_1_9390701_9390780 | 5.055 | SCAFFOLD_10_2982477_2982556 | 12400393 | (Saul 1990) |
| z | SIL27_stdr_gV | st-DR eye color | g/V | 5.041 | SCAFFOLD_1_9390701_9390780 | 5.071 | SCAFFOLD_2_4551481_4551560 | 16697318 | (Saul 1990) |
SILs, segmental introgression lines. Shown is the reference code for Figure 3 (a graphical depiction of SIL genotypes), name of the introgression, locus used in the introgression, introgressed and background species (V for N. vitripennis or G for N. giraulti), location of the introgression, introgression size, and relevant citation for the loci used in the introgression. Note that the introgression names show the species genotype of the introgressed region as a small letter (v, g or l for N. longicornis) and the background species as a large letter (V or G).