Skip to main content
. 2013 Feb 1;3(2):225–230. doi: 10.1534/g3.112.004341

Table 2. Contig metrics from the de novo assembly based on transcriptome data pooled from three different Teleogryllus oceanicus tissues.

Metric Number (>500 bp) Total Number
Contig number 12,332 41,965
Average contig size 894 459
Median contig size 727 373
Median read depth 73 2.4
Mean read depth 176 9
Largest contig 10,718

Read depth was skewed toward very small numbers, with only 1424 sequences mapped by >30 reads.