Table 2. Comparison of estimated and refined tNCS operators.
Rotation angle (°) | Translation vector (fractional) | ||||
---|---|---|---|---|---|
PDB code | Refined | PDB | Angular difference† | Refined | PDB‡ |
2fuq | 0.33 | 0.89 | 0.78 | −0.038, 0.497, 0.000 | −0.038, 0.499, 0.000 |
1un7 | 2.05 | 2.52 | 1.05 | 0.487, 0.500, 0.500 | 0.482, 0.499, 0.500 |
1y9r | 2.49 | 1.24 | 2.60 | 0.325, 0.662, 0.589 | 0.324, 0.662, 0.589 |
1eh4 | 3.63 | 4.00 | 1.24 | 0.009, 0.007, 0.493 | 0.002, 0.010, 0.493 |
1upp | 4.01 | 3.43 | 2.93 | 0.004, −0.496, 0.494 | 0.007, −0.498, 0.496 |
Angular difference measured using the symmetry-related transformation that agrees most closely with the NCS translation in the PDB file and choosing the (arbitrary) direction of rotation that minimizes the angular difference.
PDB translation vector measured as a vector between centres of mass of common main-chain atoms