Table 3. PDE10A Region 1 SNVs with MAF <0.01.

Observed SNP	Chromosome	Position	A1	A2	Controls (N=801)	BPD cases (N=999)	BPD I cases (N=807)
					MAF	MAF	MAF
C>T	6	166042004	T	C	0	0.000502	0.0006219
G>A	6	166045644	A	G	0.000624	0.001505	0.001863
T>G	6	166046710	G	T	0.000625	0.001503	0.001861
delATT	6	166046780_166046778	A	T	0	0.001001	0.001239
C>G	6	166052752	G	C	0.000624	0.001001	0.001239
insA	6	166054721	A	T	0	0.001001	0.001239
A>T	6	166056798	T	A	0.000624	0.003504	0.003717
C>T	6	166058713	T	C	0	0.000502	0.0006203

Abbreviations: BPD, bipolar disorder; MAF, minor allele frequency; SNP, single-nucleotide polymorphism; SNV, single-nucleotide variant.

Position: February 2009 (GRCh37/hg19) build physical position. A1: minor allele. A2: major allele.