Table 2.
Peptide support for intronized retrogenes
| Gene name | Peptide match | Peptide database referencea | Location in protein seq | BLASTP hitsb |
|---|---|---|---|---|
| HSP90B2P |
NLNFVKGVVDSGGLSLNVSCETLQQHK |
PRIDE: 8670 |
86 |
Self (4e-19, 100 %) |
| IEKAMVSQCLTESLCALVASQYGWSGNMER |
PRIDE: 8670 |
270 |
Self (4e-24, 100 %) |
|
| AMVSQCLTESLCALVASQYGWSGNMER |
PRIDE: 8671; 8668 |
273 |
Self (7e-21, 100 %) |
|
| MAETIQEVEDEYKAFCK |
PRIDE: 8672 |
1 |
Self (9e-11, 100 %) |
|
| CVFITDDFRDTMPK |
PRIDE: 8669 |
72 |
Self (7e-08, 100 %) |
|
| HSP90AA4P |
HNNDEQYAWESSLR |
PeptideAtlas: PAp00393519 |
93 |
Self (1e-07, 100 %) |
| ADLINNLGTITK |
PeptideAtlas: PAp01587648 |
20 |
Self (8e-04, 100 %) |
|
| DQVANSTIVQR |
PeptideAtlas: PAp00565957 |
207 |
Self (0.005, 100 %) |
|
| HSP90AA5P | IKEIVKKHSQFIGYPITLFVEKKR |
PeptideAtlas: PAp00040955; PAp00423980 |
33 |
Self (2e-17, 100 %) |
| HGLEVIYMIELIDKYCVQQLK | PeptideAtlas: PAp00040711 | 199 | Self (2e-15, 100 %) |