Table 3. The diversity indices and richness estimators of the bacterial and archaeal 16S rRNA gene clone libraries. OTUs of the 16S rRNA gene sequences were determined at 3% for bacteria and 2% for archaea sequence distance cut-off using the DOTUR program.
Clone library | No. of clone | No. of singleton | No. of OTUs | C | H | 1/D | J | SACE | Schao1 |
BU1368 | 180 | 166 | 39 | 88.9 | 4.37 | 15.48 | 0.828 | 71.0 | 63.4 |
BU1369 | 196 | 155 | 54 | 85.7 | 4.80 | 16.10 | 0.834 | 91.3 | 86.5 |
BU1370 | 196 | 193 | 64 | 79.6 | 5.19 | 23.53 | 0.865 | 128.6 | 142.8 |
BU1371 | 185 | 166 | 61 | 81.1 | 5.06 | 18.44 | 0.853 | 115.9 | 101.6 |
AU1368 | 88 | 66 | 13 | 92.0 | 2.40 | 3.53 | 0.650 | 28.2 | 34 |
AU1369 | 92 | 72 | 20 | 83.7 | 2.96 | 4.97 | 0.683 | 69.8 | 111 |
AU1370 | 88 | 63 | 17 | 89.8 | 2.66 | 3.69 | 0.649 | 29.5 | 29 |
AU1371 | 87 | 60 | 15 | 90.8 | 2.23 | 2.52 | 0.571 | 28.5 | 29 |
The coverage (C), Shannon-Weiner (H), Simpson (D) and evenness (J) indices, and SACE and Schao1 richness estimators were calculated using the OTU data.