A) The number of nodes shared with the global network for each perturbed network is shown at various sample removal rates (x-axis) when probe sets were retained at rates of 25% (A1), 50% (A2), 75% (A3) and 100% (A4); B) The number of edges shared with the global network for each perturbed network is shown at various sample removal rates (x-axis) when probe sets were retained at rates of 25% (B1), 50% (B2), 75% (B3), and 100% (B4); C) The average Kappa, κ, (functional similarity) between modules in the perturbed network with modules in the global network is shown at various sample removal rates (x-axis) when probe sets were retained at rates of 25% (C1), 50% (C2), 75% (C3), and 100% (C4). The single line in the far right of plots A4, B4 and C4 represents the global network.