Table 2. Conservation of relationships between global and perturbed networks.
| Species | Percent Samples/Probe sets | Global Edges | Edgesa | Shared Edgesb | Edges Lost | New Edges | Modules | Average Kappac |
| Human | 75/100 | 3,111 | 2,763 | 2,622 (84%) | 489 | 141 | 129 | 0.72 |
| Rice | 75/100 | 34,470 | 36,210 | 32,530 (94%) | 1,940 | 3,680 | 748 | 0.82 |
| Yeast | 75/100 | 8,643 | 8,758 | 8,240 (95%) | 403 | 518 | 179 | 0.73 |
| Human | 50/100 | 3,111 | 2,542 | 2,326 (75%) | 785 | 216 | 117 | 0.66 |
| Rice | 50/100 | 34,470 | 38,620 | 31,720 (92%) | 2,750 | 6,900 | 786 | 0.78 |
| Yeast | 50/100 | 8,643 | 8,559 | 7,869 (91%) | 774 | 690 | 180 | 0.67 |
| Human | 25/100 | 3,111 | 2,538 | 2,096 (67%) | 1,015 | 442 | 124 | 0.59 |
| Rice | 25/100 | 34,470 | 34,530 | 28,080 (81%) | 6,390 | 6,450 | 710 | 0.71 |
| Yeast | 25/100 | 8,643 | 8,583 | 7,437 (86%) | 1,206 | 1,146 | 171 | 0.65 |
a
The average number of edges in network with samples removed.
b
Edges in common between the perturbed network and the global network.
c
Kappa = 1 indicates perfect similarity, Kappa>0 is non-significant.