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. 2013 Feb 7;8(2):e55736. doi: 10.1371/journal.pone.0055736

Table 2. List of considered anomalies.

Code Description
Region A Cephalic vertebrae (carrying epipleural ribs)
B Pre-haemal vertebrae (carrying epipleural and pleural ribs and open haemal arch, without haemal spine)
C Haemal vertebrae (with haemal arch closed by haemal spine)
D Caudal vertebrae (with haemal and neural arches closed by modified spines)
E Pectoral fin
F Anal fin
G Caudal fin
H Dorsal spines
I Dorsal soft rays
L Pelvic fin
Anomalies 1 Kyphosis
2 Lordosis
3 Partial vertebral fusion
3* Total vertebral body fusion
4 Vertebral anomaly (shape anomaly, ossification ridges, marked reduction in length or elongation, intervertebral bony plate)
5 Anomalous neural arch and/or spine
5* Supernumerary neural elements/absence of neural elements
6 Anomalous haemal arch and/or spine
6* Supernumerary haemal elements/absence of haemal elements
7 Anomalous rib
7* Supernumerary pleural rib
8 Anomalous pterygiophores (anomalous, absent, fused, supernumerary)
9 Anomalous hypural (anomalous, absent, fused, supernumerary)
9* Anomalous or broken parahypural or fused with hypural/haemaspine
10 Anomalous epural (anomalous, absent, fused, supernumerary)
11 Anomalous ray (anomalous, absent, fused, supernumerary)
12 Swim bladder anomaly
13 Presence of calculi in the urinary ducts
14 Anomalous maxillary and/or pre-maxillary
15 Anomalous dentary
16 Other cephalic deformities (glossohyal, neurocranium, ..)
17L/R Anomalous left/right opercular plate
17*L/R Anomalous, absent, fused branchiostegal ray
18 Predorsal bones anomalies
19 Hypural with decalcifications
20 Decalcified pterygophore
21 Anomalous epipleural ribs
22 Anomalous dorsal ribs
23 Anomalous pleural ribs
24 L/R Decalcified left/right opercular plate
25 Epural with decalcifications
26 Supernumerary bone
27 Decalcified urostyle
28 Decalcified vertebrae
29 Anomalous postcleithrum
S Scoliosis
Cl L/R Anomalous left/right cleithrum
Cor L/R Anomalous left/right coracoid

Italics highlight severe anomalies, defined as those that affect the external shape of the fish body.