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. 2013 Feb 7;2013:bat001. doi: 10.1093/database/bat001

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© The Author(s) 2013. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/), which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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System flow of pseudoMap. The system flow of pseudoMap mainly includes the collection of datasets such as TPGs, parental genes, miRNAs, piRNAs, sRNA deep sequencing data and expression profiles; integration of various tools and identification of functions and regulations of TPGs. Based on a genome-wide computational pipeline of sequence-alignment approaches and gene expression profiles, this work constructed pseudoMap database for elucidation of two major discoveries: TPG-derived esiRNA-target interaction and miRNA-decoy mechanism of TPGs.