TABLE 2.
Sequences of solid-phase primers used in this study
| Solid-phase primer | Species from which thesequence was derived | EMBL accession no. | Sequence (5′ to 3′) |
|---|---|---|---|
| 1a | Streptococcus equi subsp. equi | AJ549385a | GGGAGCGAAGTTAAGTAGCGAAGTTAGAGAC |
| 1b | Streptococcus equi subsp. zooepidemicus | AJ549077a | CACTGCCAAGAAAAGCTTCTAGCGATATG |
| 1c | Streptococcus equi subsp. equi | AJ549385a | CACTGCCAAGAAAAGCTTCTAGCGATACG |
| 2a | Staphylococcus aureus | X68425 | CTAAGGGCGTTGAAGCATGATCGTA |
| 2b | Staphylococcus aureus | X68425 | AGTAGGATAGGCGAAGCGTGCGATT |
| 2c | Staphylococcus intermedius | AJ549078a | GATGGATAACAGGTTGATATTCCTGTACCACC |
| 3a | Rhodococcus equi | AJ549079a | TTTTTTCCGAAGCCGCGGCATTCAC |
| 3b | Rhodococcus equi | AJ549080a | GGTTGATATTCCCGTACCCGTGTGAAC |
| 3c | Pseudomonas aeruginosa | AJ549386a | GTTAATCGACGCAGGGTTAGTCGGTT |
| 4a | Actinobacillus equuli | AJ549506a | GGTTATCAGACTGTTGGATGTCTGTTTAAGCC |
| 4b | Bordetella bronchiseptica | X70371 | AGGGTGTTGGACGTCCCTGTTGCT |
| 4c | Taylorella equigenitalis | AJ549507a | GCTGATGGAAGTGCTCGGTATTGTAGC |
| 5a | Escherichia coli | AJ549508a | CCCGGTTTAAGCGTGTAGGCTGGT |
| 5b | Escherichia coli | AJ549508a | GCACGCTGATATGTAGGTGAAGCGACT |
| 5c | Escherichia coli | AF053966 | GCACGCTGATATGTAGGTGAAGTCCCT |
| 6a | Escherichia coli | AJ549508a | CTGATATGTAGGTGAAGCGACTTGCTCG |
| 6b | Citrobacter diversus | AJ549509a | CTCCAGGCAAATCCGGTGCACTTA |
| 6c | Citrobacter freundii | AJ549510a | GAAGGCACGCTGATATGTAGGTGAAGTGAT |
| 7a | Citrobacter amalonaticus | U88707 | CACGCTGATATGTAGGTGAAGCGATTTACTCC |
| 7b | Salmonella enterica serovar Abortusequi | AJ549511a | TGTGTGTTCCAGGTAAATCCGGTTC |
| 7c | Salmonella enterica serovar Abortusequi | AJ549511a | GAGGCACTACGGTGCTGAAGCAAC |
| 8a | Klebsiella pneumoniae | AJ549512a | CCGGTTTAAGCATGTAGGCTGGTTG |
| 8b | Klebsiella oxytoca | AJ549513a | GGATGTTCCAGGTAAATCCGGAACG |
| 8c | Proteus vulgaris | AJ549516a | GGAAACGGGTTAATATTCCCGTACTGGTG |
| 9a | Proteus vulgaris | AJ549516a | TAAGTGAAGTCCCTTGCGGACGGAGCC |
| 9b | Pantoea agglomerans | AJ549514a | CAGGAAAAGCCTCTAAGCATCAGGTAACACAG |
| 9c | Enterobacter cloacae | AJ549515a | TTCGCTGATATGTAGGTGAAGCCCC |
| 10a | Yersinia enterocolitica | U77925 | GAGTGACCAGGTAAATCCGGTTGCTTA |
| 10b | Ralstonia solanacearum | AL646081 | TTCACTTAGGCAAATCCGGGTGCGTG |
| 10c | Bacillus cereus | AJ310099 | CCGAAAATGTACCGGGGCTAAATACACC |
| 11a | Wolbachia pipientis | U23710 | GGTTCCTAAGGCGAGTCCGTAAAGGAG |
| 11b | Haemophilus influenzae | AF090108 | GCGTTGTGTAAGCGGAAGAAGGTTC |
Sequence determined in this study.