Table 3.
Oligonucleotides used in this study
| NAME | Sequence (5′ –> 3′) | Reference |
|---|---|---|
| 5′ –PMA1(sense) |
CGACGACGAAGACAGT GATAACG |
This study |
| 5′ –PMA1(anti-sense) |
ATTGAATTGGACCGACGAAAAACAT AAC |
This study |
| 3′ –PMA1 (sense) |
AAA CAA CCA GCT TCG GTG TGT GTG |
This study |
| 3′ –PMA1 (anti-sense) |
TAG GAG CCA ACA AGA ATA AGC CGC |
This study |
| ILV5 (sense) |
ATT GGG TAC CAG TCC AAA GCA CCT |
This study |
| ILV5 (anti-sense) |
ACC GTC GAA GAA GCT ACC CAA TCT |
This study |
| RPS25A (sense) |
TGG GTA GCT AGA TCT GTG CTA TGG |
This study |
| RPS25A (anti-sense) |
GAA ATA GTG ACT GGC CAA TCC AGG |
This study |
| GAL1 (sense) |
TGCTAGATCGCCTGGTAGAG |
[72] |
| GAL1 (anti-sense) |
GCAAACCTTTCCGGTGCAAG |
[72] |
| MND1 (sense) |
CCATCATGGTACACAGGACTGAACA |
This study |
| MND1 (anti-sense) |
GGAGTGATACTGTCTGTCTCTTTGGC |
This study |
| BET4 (sense) |
CGACAGCAAGTTCAGTTTGCCACA |
This study |
| BET4 (anti-sense) |
AGCGAGTTTGGCTTCTGAGTTGGA |
This study |
| SEC31 (sense) |
CCAAATGATATCGCCCAGAGGAATG |
This study |
| SEC31 (anti-sense) |
CCGGCAGCCAAGTACAAAGTCAAA |
This study |
| RPS13A (sense) |
CAGAAAGCACTGGCAAGAACGTGT |
This study |
| RPS13A (anti-sense) |
TCTGCCAGCTCTGACCTTTCTGTT |
This study |
| RPS14A (sense) |
TGGTAAGGAAACCATCGCCAGAGT |
This study |
| RPS14A (anti-sense) |
TAACGTGAACGGCAGTGATACCGA |
This study |
| YLL011W (sense) |
AGCCAGTTTCCGATCTATCATGGG |
This study |
| YLL011W (anti-sense) |
GGCCTCCATTGGATTCCAGCAAAT |
This study |
| snR37 (sense) |
TGGAGTGTGAGTGATGAGGAGCTT |
This study |
| snR37 (anti-sense) |
GGAGTAGTCAAAGTTCATTCAGCTATGGG |
This study |
| snR42 (sense) |
CTGTTGGTGCTGAGGTAATCCATC |
This study |
| snR42 (anti-sense) |
ACCTCAGGTCATCACCATTTCATGGG |
This study |
| ACT1 5′ end (sense) |
GTCCCAATTGCTCGAGAGATTTCTC |
This study |
| ACT1 5′ end(anti-sense) |
CATGATACCTTGGTGTCTTGGTC |
This study |
| ACT1 3′ end(sense) |
TCGAACAAGAAATGCAAACCG |
This study |
| ACT1 3′ end(anti-sense) |
GGCAGATTCCAAACCCAAAAC |
This study |
| CDC2 (sense) |
CCTGCCTTTAAGGCTTATGGA |
This study |
| CDC2 (anti-sense) |
CCACGAATAGGCTCAATAACA |
This study |
| TRA1 (sense) |
CCAATTTTTGATAAGCCACCCTGA |
This study |
| TRA1 (anti-sense) |
CGTAATTTCTAAGGTCTTGTTCTCCCA |
This study |
| SPS2 (sense) |
ACTGTCCCGTCATTGATGCGTCTC |
[73] |
| SPS2 (anti-sense) |
GGGATCGTTGCATTAGTGTTAACC |
[73] |
| No ORF (sense) |
GAAAAAGTGGGATTCTGCCTGTGG |
[68] |
| No ORF (anti-sense) |
GTTTGCCACAGCGACAGAAGTATAACC |
[68] |
| tG (CCC) D (sense) |
AAATGCGGAAGCCGGGAATCGAA |
This study |
| tG (CCC) D (anti-sense) |
GGTATTTCTTTGCGCGGTTACGGT |
This study |
| tL (UAG) L1 (sense) |
GGT TAAACCCAC CTAAATCTGACGCC |
This study |
| tL (UAG) L1 (anti-sense) |
TGGCTAACCCAATGGCTTGT |
This study |
| tW (CCA) P (sense) |
AAGCTGAGTGTCCGCTGTGATGAT |
This study |
| tW (CCA) P (anti-sense) |
TTGCAATCGAAGGGTTGCAGGTTC |
This study |
| tK (UUU )D (sense) |
TGTTGGAACGGTAAAGACCAGTGC |
This study |
| tK (UUU) D (anti-sense) |
AAAGCCGAACGCTCTACCAACTGA |
This study |
| tG (CCC) probe |
ATGCTTGGGAAGCATAAATTCTA |
This study |
| tL (UAG) probe |
AAGATATCAGAGCCTAAATCTGACG |
[71] |
| pre-t L(UAG) probe |
GATATCAGAGATTTTAGAGGTTAAATCCACCT |
[71] |
| 5.8S probe |
GCGTTGTTCATCGATGC |
This study |
| tK (UUU) probe |
TGACATTTCGGTTAAAAGCCGAACGCTCTACCAAC |
[71] |
| tR (CCG) L (sense) |
AAGTACGACATCAAAGTCGCCGAG |
This study |
| tR (CCG) L (anti-sense) |
TGCTAACCATTGCACTAGAGGAGC |
This study |
| snR128 (sense) |
ACAGTATACGATCACTCAGACATCC |
This study |
| snR128 (anti-sense) |
CACGGTGATGAAAGACTGGTTCCT |
This study |
| tR (CCU) L (sense) |
CCACATTCTCTACAATATTGATTTCCATCG |
This study |
| tR (CCU) L (anti-sense) |
CCATTACGCCAACGGAACCAACTT |
This study |
| tL (UAG) L2 (sense) |
ATCGACAGCTTCACGTGCCATTTG |
This study |
| tL (UAG) L2 (anti-sense) |
CTGATATCTTCGGATGCAAGGGTTCG |
This study |
| tL (UAG) J (sense) |
GGTTAAACCCACCTAAATCTGACGCC |
This study |
| tL (UAG) J (anti-sense) | TGGCTAACCCAATGGCTTGT | This study |