TABLE 1.
HCV isolates used for phylogenetic analysis
| Isolate | HCV genotype | Country of origin | Accession no. |
|---|---|---|---|
| HCV-1 | 1a | USA | M62321 |
| HCV-J | 1b | Japan | D90208 |
| HC-G9 | 1c | Indonesia | D14853 |
| K1R2 | 1b | Japan | D50482 |
| LC | 1 | Taiwan | U89019 |
| HD1 | 1 | Germany | U45476 |
| L2 | 1 | Korea | U01214 |
| JK1 | 1b | Japan | X61596 |
| HCV-J1 | 1 | Japan | D10749 |
| H77 | 1a | USA | AF009606 |
| JS | 1 | Japan | D85516 |
| HC-J6 | 2a | Indonesia | D00944 |
| HC-J8 | 2b | Indonesia | D10988 |
| BEBE1 | 2c | Italy | D50409 |
| JK049 | 3 | Indonesia | D63821 |
| NZL1 | 3a | Japan | D17763 |
| HCV-Tr | 3b | Thailand | E10839 |
| ED43 | 4a | Egypt | Y11604 |
| EUH1480 | 5a | United Kingdom | Y13184 |
| EUHK2 | 6a | Hong Kong | Y12083 |
| Montevideo 1 | 1 | Uruguay | AJ012831 |
| Montevideo 2 | 1 | Uruguay | AJ012832 |
| Minas 53 | 1 | Brazil | AF077230 |
| Minas 70 | 1 | Brazil | AF077232 |
| Minas 77 | 1 | Brazil | AF077235 |
| Minas 82 | 1 | Brazil | AF077236 |
| Valdivia 2 | 1 | Chile | AJ291456 |
| Valdivia 3 | 1 | Chile | AJ291457 |
| Valdivia 4 | 1 | Chile | AJ291458 |
| CR 15 | 1 | Costa Rica | AJ437146 |
| CR 20 | 1 | Costa Rica | AJ437148 |
| CR 26 | 1 | Costa Rica | AJ437150 |
| CR 29 | 3 | Costa Rica | AJ437144 |
| CR 30 | 1 | Costa Rica | AJ437147 |
| CR 32 | 1b | Costa Rica | AJ437145 |
| CR 33 | 1 | Costa Rica | AJ437149 |
| ARHG166 | 1a/c | Argentina | AY376832 |
| ARHG188 | UTa | Argentina | AY376833 |
| ARHG205 | UT | Argentina | AY376834 |
| ARHG238 | UT | Argentina | AY376835 |
| ARHG239 | UT | Argentina | AY376836 |
| ARHG74 | UT | Argentina | AY376837 |
a
UT, untypeable.