Table 3. Site list for LacI-relax, a matrix constructed to pick out known LacI sites preferentially.
| Cutoff | No. of sites | Coding, % | Intergenic, % | Known |
|---|---|---|---|---|
| 3.00 | 1 | 0 | 100 | 1/3 |
| 5.00 | 1 | 0 | 100 | 1/3 |
| 7.00 | 3 | 33 | 67 | 3/3 |
| 9.00 | 7 | 71 | 29 | 3/3 |
Note that two of the three known LacI binding sites are located in coding regions.