Table 1.
The full repertoire of secretion systems of P. fluorescens F113
| Secretion system | Phylogenetic cluster | Locus | Putative substrate |
|---|---|---|---|
| T1SS |
|
PSF113_0209-0211 |
PSF113_0208 |
| |
|
opmH (PSF113_0530)* |
|
| |
|
PSF113_1508-1510 |
PSF113_1511 |
| |
|
PSF113_2734-2736 |
PSF113_2737 |
| |
|
aprDEF (PSF113_2945-2947) |
aprA (PSF113_2949), aprI (PSF113_2948), lipA (PSF113_2944) |
| |
|
PSF113_3005-3007 |
psmE (PSF113_3004) |
| |
|
PSF113_3055-3056* |
|
| |
|
PSF113_3303-3305 |
|
| T2SS |
Xcp |
xcpP-Z (PSF113_0437-0447), xcpA (PSF113_5006) |
PSF113_0435, PSF113_0610, PSF113_2337, PSF113_3279 |
| |
Hxc |
hxcP-Z (PSF113_3690-3700) |
psp (PSF113_3701) |
| T3SS |
SPI-I |
invF-orgB (PSF113_1778-1801) |
PSF113_1802 |
| |
Hrp1 |
rspS-rspL (PSF113_5585-5610) |
ropAA-1 (PSF113_1126), ropAA-2 (PSF113_3486), ropB (PSF113_5598), ropM (PSF113_5616) |
| T4SS |
GI-like |
PSF113_3314-3334 |
|
| T5aSS |
|
PSF113_2779 |
|
| |
|
PSF113_2780 |
|
| |
|
PSF113_4399 |
|
| |
|
estA (PSF113_5339) |
|
| |
|
PSF113_5848 |
|
| T5bSS |
|
PSF113_0792-0793 |
|
| |
|
PSF113_1489-1490 |
|
| |
|
PSF113_4466-4468 |
|
| |
|
PSF113_2623-PSF113_3702 |
|
| T5dSS |
|
plpD (PSF113_1517) |
|
| T6SS |
I |
HSI-II (PSF113_5815-5833) |
hcp2 (PSF113_1976), PSF113_0495, PSF113_0666, PSF113_3144, PSF113_3904 |
| |
III |
HSI-I (PSF113_5785-5808) |
vgrG1b (PSF113_2885) |
| IVA | HSI-III (PSF113_2407-2422) |