Table 1.
Gene | Variant id | 5′UTR splice | Coding | 3′JTR sequence | GenBank id |
---|---|---|---|---|---|
SP-A1 | AD′6A | AD′ | 6A | 6A | HQ021433 |
SP-A1 | AD′6A2 | AD′ | 6A2 | 6A2 | HQ021434 |
SP-A1 | AD′6A3 | AD′ | 6A3 | 6A3 | HQ021435 |
SP-A1 | AD′6A4 | AD′ | 6A4 | 6A4 | HQ021436 |
SP-A1 | AB′D′6A | AB′D′ | 6A | 6A | JX502764 |
SP-A1 | AB′D′6A2 | AB′D′ | 6A2 | 6A2 | HQ021437 |
SP-A1 | AB′D′6A3 | AB′D′ | 6A3 | 6A3 | HQ021435 |
SP-A1 | AB′D′6A4 | AB′D′ | 6A4 | 6A4 | HQ021439 |
SP-A1 | ACD′6A | ACD′ | 6A | 6A | JX502765 |
SP-A1 | ACD′6A2 | ACD′ | 6A2 | 6A2 | HQ021440 |
SP-A1 | ACD′6A3 | ACD′ | 6A3 | 6A3 | HQ021441 |
SP-A1 | ACD′6A4 | ACD′ | 6A4 | 6A4 | HQ021442 |
SP-A2 | ABD1A | ABD | 1A | 1A | HQ021432 |
SP-A2 | ABD1A0 | ABD | 1A0 | 1A0 | HQ021421 |
SP-A2 | ABD1A1 | ABD | 1A1 | 1A1 | HQ021422 |
SP-A2 | ABD1A2 | ABD | 1A2 | 1A2 | HQ021423 |
SP-A2 | ABD1A3 | ABD | 1A3 | 1A3 | HQ021424 |
SP-A2 | ABD1A5 | ABD | 1A5 | 1A5 | HQ021425 |
SP-A2 | ABD′1A | ABD′ | 1A | 1A | HQ021426 |
SP-A2 | ABD′1A0 | ABD′ | 1A0 | 1A0 | HQ021427 |
SP-A2 | ABD′1A1 | ABD′ | 1A1 | 1A1 | HQ021423 |
SP-A2 | ABD′1A2 | ABD′ | 1A2 | 1A2 | HQ021429 |
SP-A2 | ABD′1A3 | ABD′ | 1A3 | 1A3 | HQ021430 |
SP-A2 | ABD′1A5 | ABD′ | 1A5 | 1A5 | HQ021431 |
SP-A1 | variant 1 | AB′D′ | 6A3 | 6A3 | NM_005411.4 |
SP-A1 | variant 2 | ACD′ | 6A3 | 6A3 | NM_001093770.2 |
SP-A1 | variant 3 | ABD′ | 6A3 | 6A3 | NM_001164644.1 |
SP-A1 | variant 4 | AD′ | 6A3 | 6A3 | NM_001164647.1 |
SP-A1 | variant 5 | ACD′ | 6A3 (truncated)a | 6A3 | NM_001164645.1 |
SP-A1 | variant 6 | AB′D′ | 6A3 (truncated)a | 6A3 | NM_001164646.1 |
SP-A2 | ABD′ | 1A2 | 1A0 | NM_001098668.2 |
missing a fragment of 147 nt (positions 238–435 mRNA; positions 84–231 from start codon)