Table 2.

Oligonucleotides used in this study

Name	Sequence (5′ → 3′)
25_N_18_F	CCGGGTACCGAGCTCGAATTCA
divIVA_11_B2H_R	GCGGGTACCTCAAGGAGATGATCCCA
divIVA_19_B2H_R	GCGGGTACCAATTTCAGAAGATCAAG
divIVA_21_R	GCGGGTACCAGAAGATCAAGCTGAGCT
divIVA_26_R	GCGGGTACCGCTTCAATCAGCATTTGG
divIVA_34_R	GCGGGTACCGTTCTGAACACTTTAGAC
SHW109	CTTAGGTACCAAGCTAGTAACTATGGTAGAATG
SHW110	GCGCTCGAGTTAACGTTCTTCAGATTCAGCTG
SHW111	GCGCTCGAGACGTTCTTCAGATTCAGCTG
SHW180	CGAAGTAAATGACTTCCTCGATC
SHW184	CTTAACTAGTTTTGTATAGTTCATCCATGCC
SHW237	GAACGTTTAGGTCATTTTACAAACATTGAGGAGACATTGAATAAATC
SHW238	GTGGAAGCACAAATGGATTTAATTAAAAATGACGATTGGGATCATC
SHW247	CGTCAATCCAAAGTATTCCGTACACGTTTCCAAATGCTGATTG
SHW265	CAAACAGCTGCCGAAGAAGTGAAACGCAATTCTCAAAAAGAAGCAAAG
SHW266	GCAGAAAAAAATGCTGACCGAATTATCAACGAATCGTTATCAAAATC
SHW304	AAAGGAAGGACTTGATATCGAATTCC
SHW305	TATCAAGTCCTTCCTTTTCCTCAAATAC
SHW342	ATATGTCGACACATAAAATGCATCTAGAAAGGAG
SHW343	GCGCGGATCCTTATTTGTATAGTTCATCCATGCC
SHW349	TTGCGCTCACATCAAATCGTCTCCCTCCG
SHW350	GATTTGATGTGAGCGCAACGCAAGCTTC
SHW354	GTCGTATGGAGGTGCTAGATATGCCATTAACGCCAAATGATATTC
SHW355	GTTTCTTCAATGTTTGTAAAATGACCGATTCTTTCATCAAGCTCATTG
SHW356	GACACCTCGAGCATGATGCCACCTCCATTTTTAC
SHW357	TGATGCCACCTCCATTTTTACATTTC
SHW358	AAATGGAGGTGGCATCATGCTCGAGG
SHW366	GAAGAACGTGGACTCGAGGTCGACGGTATC
SHW367	GACCTCGAGTCCACGTTCTTCAGATTCAGCTG
SHW378	CGCTGATAAAATTATCAACGAATCG
SHW379	GATAATTTTATCAGCGTTTTTCTCC
SHW380	CGCTGATGAAATTATCAACGAATC
SHW381	GATAATTTCATCAGCGTTTTTCTCC
SHW386	TCAGAACATAATTCCAAATGCTGATTGAAG
SHW387	ATTTGGAATTATGTTCTGAACACTTTAGAC
SHW425	CACAATCTAAACTTTCCAAAGATCCCAACG
SHW426	GGAAAGTTTAGATTGTGTGGACAGGTAATG
SV23	GAAAAGGAATAACTTGATATCGAATTC
SV24	GATATCAAGTTATTCCTTTTCCTCAAATAC
SV81	CGCGCGAGCTCTTATTCCTTTTCCTCAAATACAGC
SV98	CTTAGGTACCTTGGCCGGTGCAGCTTAAC
SV123	CGGGATCCAAAATGGAGGTGGCATCATGCCATTAACGCCAAATG
R131A_fw	TCAGAACAGCTTTCCAAATGCTGATTG
R131A_rev	TTTGGAAAGCTGTTCTGAACACTTTAG