Table 1. The cpDNA trnT-trnF+trnS-trnfM haplotypes detected in the sampled populations of 14 Ephedra species.
| Species | Population No. | N | Haplotypes (Individuals) | Species | Population No. | N | Haplotypes (Individuals) |
| Ephedra gerardiana | 1 | 24 | H1 (24) | 55 | 10 | H6 (10) | |
| 2 | 27 | H2 (27) | 56 | 22 | H6 (22) | ||
| 3 | 16 | H2 (16) | E. monosperma | 57 | 14 | H6 (14) | |
| 4 | 24 | H3 (24) | 58 | 8 | H6 (8) | ||
| 5 | 23 | H5 (22), H6 (1) | 59 | 16 | H6 (16) | ||
| 6 | 25 | H5 (25) | 60 | 23 | H6 (23) | ||
| 7 | 3 | H2 (3) | 61 | 17 | H6 (17) | ||
| 8 | 25 | H6 (25) | 62 | 6 | H6 (6) | ||
| 9 | 12 | H6 (12) | 63 | 6 | H6 (6) | ||
| 10 | 17 | H6 (17) | 64 | 6 | H6 (6) | ||
| E. saxatilis | 11 | 14 | H1 (14) | E. rhytidosperma | 65 | 5 | H6 (5) |
| 12 | 24 | H5 (24) | 66 | 6 | H6 (6) | ||
| 13 | 6 | H5 (6) | 67 | 6 | H6 (6) | ||
| 14 | 25 | H5 (25) | E. equisetina | 68 | 6 | H6 (6) | |
| 15 | 29 | H5 (29) | 69 | 6 | H6 (6) | ||
| 16 | 6 | H4 (6) | 70 | 6 | H6 (6) | ||
| 17 | 3 | H4 (3) | 71 | 6 | H6 (5), H16 (1) | ||
| 18 | 25 | H3 (5), H5 (20) | 72 | 5 | H6 (4), H16 (1) | ||
| 19 | 29 | H5 (29) | 73 | 10 | H23 (10) | ||
| 20 | 16 | H5 (16) | 74 | 6 | H21 (1), H23 (4), H25 (1) | ||
| 21 | 20 | H5 (20) | 75 | 7 | H23 (7) | ||
| E. saxatilis var. mairei | 22 | 24 | H9 (24) | 76 | 6 | H20 (5), H23 (1) | |
| 23 | 29 | H9 (29) | 77 | 6 | H24 (6) | ||
| 24 | 12 | H9 (12) | E. glauca | 78 | 5 | H16 (1), H21 (4) | |
| 25 | 12 | H6 (3), H9 (4), H11 (5) | E. przewalskii | 79 | 5 | H16 (5) | |
| 26 | 17 | H9 (17) | 80 | 5 | H21 (5) | ||
| 27 | 23 | H6 (1), H9 (22) | 81 | 6 | H20 (6) | ||
| 28 | 28 | H12 (23), H13 (5) | 82 | 6 | H20 (6) | ||
| 29 | 26 | H9 (24), H12 (2) | E. intermedia | 83 | 5 | H16 (5) | |
| 30 | 12 | H11 (12) | 84 | 5 | H16 (5) | ||
| E. minuta | 31 | 25 | H6 (25) | 85 | 27 | H16 (27) | |
| 32 | 17 | H6 (17) | 86 | 22 | H16 (22) | ||
| 33 | 22 | H6 (22) | 87 | 16 | H16 (6), H17 (10) | ||
| 34 | 3 | H6 (2), H10 (1) | 88 | 2 | H19 (2) | ||
| 35 | 6 | H6 (6) | 89 | 5 | H18 (5) | ||
| 36 | 20 | H6 (20) | 90 | 6 | H18 (6) | ||
| 37 | 3 | H6 (3) | 91 | 6 | H18 (6) | ||
| 38 | 26 | H6 (26) | 92 | 2 | H20 (2) | ||
| 39 | 20 | H6 (19), H14 (1) | E. intermedia var. tibetica | 93 | 14 | H6 (9), H8 (5) | |
| 40 | 16 | H6 (16) | 94 | 5 | H6 (5) | ||
| E. likiangensis | 41 | 22 | H6 (21), H8 (1) | E. rituensis | 95 | 12 | H7 (12) |
| 42 | 5 | H6 (5) | 96 | 30 | H7 (30) | ||
| 43 | 24 | H6 (24) | 97 | 24 | H7 (24) | ||
| 44 | 13 | H6 (13) | E. distachya | 98 | 3 | H21 (3) | |
| 45 | 25 | H6 (25) | 99 | 5 | H20 (5) | ||
| 46 | 22 | H6 (22) | 100 | 4 | H20 (4) | ||
| 47 | 25 | H8 (25) | 101 | 3 | H20 (3) | ||
| 48 | 4 | H8 (4) | E. sinica | 102 | 13 | H22 (13) | |
| 49 | 13 | H6 (10), H15 (3) | E. regeliana | 103 | 6 | H20 (6) | |
| 50 | 21 | H6 (21) | 104 | 6 | H7 (2), H20 (4) | ||
| 51 | 11 | H6 (11) | 105 | 5 | H19 (5) | ||
| 52 | 5 | H6 (5) | 106 | 5 | H19 (5) | ||
| 53 | 23 | H6 (23) | 107 | 5 | H19 (5) | ||
| 54 | 16 | H6 (16) | All species | Total | 1435 |
N, number of sampled individuals.