Table 1.
Chemical treatment prediction ranks
| |
ToxProfiler |
Weighted global test |
GeneCodis single annotation |
|||
|---|---|---|---|---|---|---|
| CTD | TM | CTD | TM | CTD | TM | |
| BPA |
9 (2.0e-07) |
92 (1.0e-01) |
18 (3.9e-04) |
21 (6.2e-05) |
10 (9.1e-08) |
- |
| ESThsa |
38 (8.8e-02) |
400 (2.4e-01) |
269 (3.2e-03) |
920 (5.6e-04) |
4 (2.4e-02) |
- |
| ESTmmu |
18 (3.5e-05) |
189 (1.3e-04) |
360 (5.7e-01) |
482 (4.3e-01) |
- |
- |
| TCDD |
19 (8.0e-07) |
89 (1.2e-03) |
14 (2.9e-10) |
84 (5.7e-10) |
1 (5.3e-32) |
89 (1.7e-05) |
| VitD3 |
9 (4.5e-02) |
400 (3.0e-01) |
186 (2.4e-03) |
762 (6.0e-04) |
1 (2.0e-26) |
200 (6.0e-03) |
| ZnSO4 | 9 (3.8e-05) | 6 (3.4e-04) | 3 (2.6e-06) | 4 (6.8e-05) | - | - |
Chemical treatment prediction rank and false discovery rate-corrected p-value (within parentheses) per gene expression data set for the different gene set analysis tools. Significant results (false discovery rate-corrected p<0.05) are in bold. GeneCodis only reports results with a false discovery rate-corrected p-value smaller than 0.05. Missing values denote such non-significant results.