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. 2013 Feb 14;2013:bat007. doi: 10.1093/database/bat007

Figure 1.

Figure 1

Schematic overview for YY1TargetDB data acquisition and database implementation. The experimentally verified YY1-binding motifs were collected from literatrues, mapped to the reference genomes and stored in the database. High-throughput (ChIP-seq or ChIP-on-chip) experimental datasets were downloaded from NCBI GEO server and processed by our analysis and annotation pipeline. The identifed YY1-binding loci, computationally predicted YY1 and its cofactors binding motifs were deposited into YY1TargetDB. The database in integrated with locally installed UCSC genome browser to visualize YY1-binding loci and assoicated annotation information.