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| Locus | # Validated | 70% missing | 90% missing |
| HLA-A | 808 | 0.96 | 0.94 |
| HLA-B | 1646 | 0.95 | 0.93 |
| HLA-C | 752 | 0.95 | 0.94 |
| HLA-DQA1 | 194 | 0.96 | 0.90 |
| HLA-DQB1 | 934 | 0.97 | 0.95 |
| HLA-DRB1 | 1358 | 0.90 | 0.86 |
4-digit resolution accuracies (PPV) when 70% and 90% of the inference panel SNP genotypes (GS&HLARES_EU 1/3) in the second experiment are randomly set to “missing”. No call threshold is employed. “# Validated” refers to the number of validated alleleles.
