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. 2012 Dec 20;13:716. doi: 10.1186/1471-2164-13-716

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Copyright ©2012 Wang et al.; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Analysis of Illumina short read assembly quality. Size distributions of de novo assembled contigs, scaffolds, and unigenes are shown for the (A) initial stage (S1) and (C) fast oil accumulation stage (S2) of seed development. Gap distributions of assembled scaffolds and unigenes are shown for the (B) initial stage (S1) and (D) fast oil accumulation stage (S2) of seed development. Size and gap distributions of the nonredundant unigenes are shown for the (E) initial stage (S1) and (F) fast oil accumulation stage (S2) of seed development. Gap distribution (N/size) %: gap percentage (N amount/sequence length) distribution.