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. 2013 Feb 8;14:45. doi: 10.1186/1471-2105-14-45

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Copyright ©2013 Doran and Creevey; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Sample of plots obtained using the results of SNPdat. (A) The number of non-synonymous (black) and total number of exonic SNPs (grey) found on each chromosome. (B) Distances of intergenic SNPs, upstream (black) and downstream (grey) to the nearest transcripts. (C) Synonymous versus non-synonymous SNPs: 231 exonic SNPs were non-synonymous. 96 (41.56%) in the first codon position, 103 (44.59%) in the second codon position and 32 (13.85%) in the third codon position. (D) Distances of Intronic SNPs to the nearest exon.