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The number of SNPs annotated to different regions by SNPdat and Annovar
| Region | SNPdat | Annovar |
|---|---|---|
| Coding |
299 |
299 |
| 3 prime UTR |
108 |
105 |
| 5 prime UTR |
29 |
28 |
| Intronic |
3285 |
3284 |
| Intergenic |
845 |
845 |
| Misc. |
0 |
5 |
| Total | 4566 | 4566 |
Misc features include non-coding RNA and splicing. These features were not included in the GTF version of the ensGene annotation file and so SNPdat was unable to identify them as such.
