Table 1.
Summary of G. f. fuscipes collection sites, number of individuals used for Wolbachia sequencing, infection prevalence, and sequence diversity
| Collection Site | Site Code | Latitude/ Longitude | No. of Host Individuals | Infection Prevalence (%)1 | Average No. of Nucleotide Differences | No. of Haplotypes | Hd |
|---|---|---|---|---|---|---|---|
| Pallisa |
BK |
1.02/33.88 |
2 |
53.6 (N = 69) |
4.5 |
6 |
1.000 |
| Bunghazi |
BN |
0.93/33.98 |
5 |
6.7 (N = 15) |
4.9 |
10 |
0.970 |
| Busime |
BU |
0.25/33.97 |
3 |
29.4 (N = 34) |
23.4 |
5 |
1.000 |
| Buvuma |
BV |
0.31/33.30 |
5 |
60 (N = 35) |
19.1 |
8 |
0.927 |
| Junda |
JN |
1.33/32.74 |
8 |
65.1 (N = 43) |
11.2 |
32 |
0.995 |
| Kakoga |
KK |
0.37/30.28 |
3 |
35.7 (N = 28) |
4.8 |
8 |
0.972 |
| Masindi |
MS |
1.63/31.69 |
6 |
6.3 (N = 16) |
6.0 |
14 |
1.000 |
| Murchison Falls |
MF |
2.28/31.56 |
3 |
90 (N=) |
7.4 |
19 |
0.983 |
| Osuguro |
OS |
1.53/33.50 |
2 |
20 (N = 20) |
5.3 |
3 |
1.000 |
| Lukaya River |
DRC |
−4.48/15.31 |
5 |
N/A |
N/A |
N/A |
N/A |
| Gfq Colony2 | GF | N/A | 5 | N/A | N/A | N/A | N/A |
1Infection prevalence data from [26].
2Collection site origin is unknown for the colony maintained at the Slovakia Academy of Science, Bratislava, Slovakia. Tissues were kindly provided by Peter Takac.
3Only the complete dataset was used to calculate diversity statistics in this table because the conservative dataset eliminated individuals.
Measures of Wolbachia groEL nucleotide differences and genetic diversity were calculated using the complete dataset3. Hd refers to groEL haplotype diversity within a site.