Table 3. Unconditional QTLs detected for grain filling rate in the immortalized F2 population.
Year | Location | Stage/Trait | QTLa | Markers interval | LODb | Ac | Dc | Effectsd | R2e(%) |
2009 | Zhengzhou | I | qGFR5 | bnlg1847-umc1524 | 4.67 | 0.012 | −0.006 | PD | 22.05 |
I | qGFR6a | phi299852-umc1341 | 4.44 | 0.014 | −0.005 | PD | 33.85 | ||
II | qGFR7a | umc1987-bnlg1305 | 5.12 | 0.043 | 0.005 | A | 10.96 | ||
II | qGFR7b | bnlg1305-dupssr11 | 3.72 | 0.041 | −0.003 | A | 10.96 | ||
III | qGFR9 | bnlg1525-umc1310 | 4.29 | −0.029 | 0.058 | OD | 7.51 | ||
IV | qGFR6b | umc1006-bnlg1188 | 4.49 | 0.084 | −0.042 | PD | 25.04 | ||
IV | qGFR6c | phi077-bnlg1371 | 4.25 | 0.085 | −0.051 | PD | 24.37 | ||
IV | qGFR6d | umc1818-umc1006 | 4.16 | 0.077 | −0.030 | PD | 21.14 | ||
IV | qGFR6e | umc2315-phi423796 | 4.07 | 0.063 | −0.055 | D | 13.52 | ||
V | qGFR6d | umc1818-umc1006 | 5.27 | −0.035 | 0.077 | OD | 5.31 | ||
VI | qGFR7b | bnlg1305-dupssr11 | 4.44 | 0.086 | −0.028 | PD | 22.91 | ||
KW | qKW7a | umc1987-bnlg1305 | 7.46 | 0.020 | 0.003 | A | 10.59 | ||
KW | qKW10a | bnlg1185-umc2021 | 4.72 | 0.015 | −0.007 | PD | 14.94 | ||
KW | qKW3a | bnlg1160-phi046 | 3.96 | −0.015 | −0.004 | PD | 12.07 | ||
KW | qKW7b | umc1929-bnlg1808 | 3.92 | −0.025 | 0.006 | PD | 17.99 | ||
Anyang | I | qGFR6a | phi299852-umc1341 | 4.07 | 0.012 | −0.006 | PD | 23.3 | |
II | qGFR7a | umc1987-bnlg1305 | 4.29 | 0.051 | −0.002 | A | 11.92 | ||
II | qGFR7b | bnlg1305-dupssr11 | 3.92 | 0.056 | −0.016 | PD | 15.73 | ||
III | qGFR9 | bnlg1525-umc1310 | 4.09 | −0.027 | 0.056 | OD | 6.67 | ||
IV | qGFR6b | umc1006-bnlg1188 | 4.39 | 0.088 | −0.045 | PD | 25.17 | ||
IV | qGFR6e | umc2315-phi423796 | 4.08 | 0.063 | −0.059 | D | 12.61 | ||
IV | qGFR6c | phi077-bnlg1371 | 3.83 | 0.082 | −0.054 | PD | 20.75 | ||
V | qGFR6d | umc1818-umc1006 | 5.09 | −0.035 | 0.076 | OD | 5.32 | ||
VI | qGFR7b | bnlg1305-dupssr11 | 3.94 | 0.061 | −0.008 | A | 15.42 | ||
KW | qKW10a | bnlg1185-umc2021 | 5.49 | 0.016 | −0.004 | PD | 16.64 | ||
KW | qKW5 | umc1524-umc1537 | 4.91 | −0.017 | −0.001 | A | 17.34 | ||
2010 | Zhengzhou | I | qGFR6a | phi299852-umc1341 | 3.78 | 0.010 | −0.009 | D | 19.83 |
II | qGFR7a | umc1987-bnlg1305 | 4.11 | 0.041 | −0.004 | A | 13.27 | ||
II | qGFR7b | bnlg1305-dupssr11 | 4.07 | 0.052 | −0.028 | PD | 21.73 | ||
III | qGFR9 | bnlg1525-umc1310 | 4.07 | −0.027 | 0.056 | OD | 6.67 | ||
IV | qGFR6c | phi077-bnlg1371 | 3.8 | 0.081 | −0.050 | PD | 21.67 | ||
V | qGFR6d | umc1818-umc1006 | 4.54 | −0.036 | 0.074 | OD | 5.49 | ||
VI | qGFR7b | bnlg1305-dupssr11 | 4.7 | 0.085 | −0.021 | PD | 22.08 | ||
KW | qKW7a | umc1987-bnlg1305 | 6.68 | 0.021 | 0.002 | A | 12.65 | ||
KW | qKW7b | umc1929-bnlg1808 | 4.98 | −0.021 | 0.003 | A | 18.92 | ||
KW | qKW10b | phi323152-umc2351 | 4.15 | 0.013 | −0.005 | PD | 10.71 | ||
Anyang | I | qGFR1 | umc1396-umc1122 | 3.98 | −0.003 | 0.013 | OD | 15.03 | |
II | qGFR5 | bnlg1847-umc1524 | 5.09 | −0.048 | −0.019 | PD | 16.39 | ||
II | qGFR7b | bnlg1305-dupssr11 | 4.29 | 0.052 | −0.028 | PD | 22.03 | ||
III | qGFR9 | bnlg1525-umc1310 | 4.28 | −0.028 | 0.057 | OD | 7.01 | ||
IV | qGFR6f | bnlg2191-umc1257 | 4.19 | 0.024 | −0.060 | OD | 5.88 | ||
V | qGFR6d | umc1818-umc1006 | 4.6 | −0.032 | 0.075 | OD | 5.42 | ||
VI | qGFR7b | bnlg1305-dupssr11 | 4.85 | 0.088 | −0.022 | PD | 23.3 | ||
KW | qKW7a | umc1987-bnlg1305 | 6.54 | 0.018 | 0.002 | A | 10.45 | ||
KW | qKW10a | bnlg1185-umc2021 | 4.24 | 0.014 | −0.007 | PD | 13.53 |
Note: aUnconditional QTLs detected for grain filling rate in the IF2 population;
Logarithm of Odds for each QTL.
A, additive values; D, dominant values;
The effect of each QTL; A, additive; PD, partial dominance; D, dominance; OD, overdominance;
R2 contribution rate.