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. 2013 Feb 18;8(2):e56344. doi: 10.1371/journal.pone.0056344

Table 3. Unconditional QTLs detected for grain filling rate in the immortalized F2 population.

Year Location Stage/Trait QTLa Markers interval LODb Ac Dc Effectsd R2e(%)
2009 Zhengzhou I qGFR5 bnlg1847-umc1524 4.67 0.012 −0.006 PD 22.05
I qGFR6a phi299852-umc1341 4.44 0.014 −0.005 PD 33.85
II qGFR7a umc1987-bnlg1305 5.12 0.043 0.005 A 10.96
II qGFR7b bnlg1305-dupssr11 3.72 0.041 −0.003 A 10.96
III qGFR9 bnlg1525-umc1310 4.29 −0.029 0.058 OD 7.51
IV qGFR6b umc1006-bnlg1188 4.49 0.084 −0.042 PD 25.04
IV qGFR6c phi077-bnlg1371 4.25 0.085 −0.051 PD 24.37
IV qGFR6d umc1818-umc1006 4.16 0.077 −0.030 PD 21.14
IV qGFR6e umc2315-phi423796 4.07 0.063 −0.055 D 13.52
V qGFR6d umc1818-umc1006 5.27 −0.035 0.077 OD 5.31
VI qGFR7b bnlg1305-dupssr11 4.44 0.086 −0.028 PD 22.91
KW qKW7a umc1987-bnlg1305 7.46 0.020 0.003 A 10.59
KW qKW10a bnlg1185-umc2021 4.72 0.015 −0.007 PD 14.94
KW qKW3a bnlg1160-phi046 3.96 −0.015 −0.004 PD 12.07
KW qKW7b umc1929-bnlg1808 3.92 −0.025 0.006 PD 17.99
Anyang I qGFR6a phi299852-umc1341 4.07 0.012 −0.006 PD 23.3
II qGFR7a umc1987-bnlg1305 4.29 0.051 −0.002 A 11.92
II qGFR7b bnlg1305-dupssr11 3.92 0.056 −0.016 PD 15.73
III qGFR9 bnlg1525-umc1310 4.09 −0.027 0.056 OD 6.67
IV qGFR6b umc1006-bnlg1188 4.39 0.088 −0.045 PD 25.17
IV qGFR6e umc2315-phi423796 4.08 0.063 −0.059 D 12.61
IV qGFR6c phi077-bnlg1371 3.83 0.082 −0.054 PD 20.75
V qGFR6d umc1818-umc1006 5.09 −0.035 0.076 OD 5.32
VI qGFR7b bnlg1305-dupssr11 3.94 0.061 −0.008 A 15.42
KW qKW10a bnlg1185-umc2021 5.49 0.016 −0.004 PD 16.64
KW qKW5 umc1524-umc1537 4.91 −0.017 −0.001 A 17.34
2010 Zhengzhou I qGFR6a phi299852-umc1341 3.78 0.010 −0.009 D 19.83
II qGFR7a umc1987-bnlg1305 4.11 0.041 −0.004 A 13.27
II qGFR7b bnlg1305-dupssr11 4.07 0.052 −0.028 PD 21.73
III qGFR9 bnlg1525-umc1310 4.07 −0.027 0.056 OD 6.67
IV qGFR6c phi077-bnlg1371 3.8 0.081 −0.050 PD 21.67
V qGFR6d umc1818-umc1006 4.54 −0.036 0.074 OD 5.49
VI qGFR7b bnlg1305-dupssr11 4.7 0.085 −0.021 PD 22.08
KW qKW7a umc1987-bnlg1305 6.68 0.021 0.002 A 12.65
KW qKW7b umc1929-bnlg1808 4.98 −0.021 0.003 A 18.92
KW qKW10b phi323152-umc2351 4.15 0.013 −0.005 PD 10.71
Anyang I qGFR1 umc1396-umc1122 3.98 −0.003 0.013 OD 15.03
II qGFR5 bnlg1847-umc1524 5.09 −0.048 −0.019 PD 16.39
II qGFR7b bnlg1305-dupssr11 4.29 0.052 −0.028 PD 22.03
III qGFR9 bnlg1525-umc1310 4.28 −0.028 0.057 OD 7.01
IV qGFR6f bnlg2191-umc1257 4.19 0.024 −0.060 OD 5.88
V qGFR6d umc1818-umc1006 4.6 −0.032 0.075 OD 5.42
VI qGFR7b bnlg1305-dupssr11 4.85 0.088 −0.022 PD 23.3
KW qKW7a umc1987-bnlg1305 6.54 0.018 0.002 A 10.45
KW qKW10a bnlg1185-umc2021 4.24 0.014 −0.007 PD 13.53

Note: aUnconditional QTLs detected for grain filling rate in the IF2 population;

b

Logarithm of Odds for each QTL.

c

A, additive values; D, dominant values;

d

The effect of each QTL; A, additive; PD, partial dominance; D, dominance; OD, overdominance;

e

R2 contribution rate.