Table 4. Protein domains and functions of 21 unannotated gene sequences differentially expressed in the microarray analysis.
Transcriptome ID | Signal peptide | Domain type* | Domain function |
A86K5 | Absent | cytochrome b | - electron carrier activity - oxidoreductase activity |
ANCWJrev | Absent | Peptidase_M14 | - metallocarboxypeptidase activity - zinc ion binding |
AQEONrev | Present | MFS_general_subst_transpt | secondary membrane transporter |
AY47U | Present | myosin head | - motor activity - ATP binding |
B11UPrev | Absent | fibrillar collagen | extracellular matrix structural constituent |
BXWCQrev | Absent | WAP-4-diS_core | peptidase inhibitor activity |
C0173 | Absent | Actin | protein binding |
C95Y3rev | Present | ATPase_P-typ_ion-transptr | - ATP binding - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism |
CFFRCrev | Absent | MFS_general_subst_transpt | secondary membrane transporter |
CGC11rev | Absent | pyruvate kinase | - magnesium ion binding - pyruvate kinase activity - potassium ion binding |
CIQIV | Present | Chitin_bind_4 | structural constituent of cuticle |
CJ2P2 | Present | actin zf-C2H2 | - protein binding - zinc ion binding |
CMRY6rev | Present | zf-C2H2 | zinc ion binding |
Contig 1137rev | Absent | ATP-gua_Ptrans | - kinase activity - transferase activity, transferring phosphorus-containing groups |
Contig 1413rev | Absent | RNA-binding S4 Blue (type 1) copper protein | - RNA binding - copper ion binding - electron carrier activity |
Contig 227rev | Absent | zf-CCHC | - nucleic acid binding - zinc ion binding |
Contig 905rev | Present | MFS_general_subst_transpt | secondary membrane transporter |
CP026 | Absent | ATP-gua_Ptrans | - kinase activity - transferase activity, transferring phosphorus-containing groups |
DFP6W | Absent | Destabilase | lysozyme activity |
EBSXErev | Present | Ser/Thr_prot_kinase-like | - protein serine/threonine kinase activity - ATP binding |
EY7U2 | Absent | AA_TRANSFER_CLASS_2 Lipocalin like | transferase activity binding |
These unannotated gene sequences were found to be statistically significantly (p<0.05) and 2- or 4-fold and greater differentially expressed in the single pair-wise comparisons of albino versus light and albino versus dark groups, but not statistically significant between the light and dark groups. For ease of readability, protein domain results of the unannotated probes of each individual comparison were combined into one table.
Abbreviations for domain types in Table 4: ATP-gua_Ptrans = ATP:guanido phosphotransferase, C-terminal catalytic domain; zf-CCHC = Zinc finger, CCHC-type; WAP-4-diS_core = Whey acidic protein, 4-disulphide core; MFS_gen_subst_transpt = Major facilitator superfamily, general substrate transporter; Chitin_bind_4 = Insect cuticle protein; AA_TRANSFER_CLASS_2 = Aminotransferase, class-II, pyridoxal-phosphate binding site; Peptidase_M14 = Peptidase M14, caboxypeptidase D unit 2; ATPase_P-typ_ion-transptr = ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/H-transporter; zf-C2H2 = Zinc finger, C2H2-type; Ser/Thr_prot_kinase-like = Serine/threonine-protein kinase-like.