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. 2013 Feb 21;8(2):e56989. doi: 10.1371/journal.pone.0056989

Table 1. Spearman rank correlations (RT qPCR data vs. metabolite data)a, in the expanded patient cohort, of genes identified by microarray screening.

6-TGN meTIMP Ratio meTIMP/6-TGN
Gene Rs P Arrayb Rs P Arrayb Rs P Arrayb
CD1D 0.27 0.05 −0.26 0.06 N 0.33 0.02 N
CTSS 0.16 0.26 0.39 0.003 0.38 0.004 N
DEF8 0.32 0.02 P −0.17 0.24 0.27 0.05
FAM156A 0.18 0.18 0.33 0.01 N 0.34 0.01 N
GNB4 0.17 0.22 0.33 0.01 N 0.37 0.006 N
HVCN1 0.32 0.02 P −0.09 0.51 −0.20 0.16 N
LAP3 0.24 0.08 −0.22 0.10 0.28 0.04 N
PLCB2 0.19 0.17 P 0.37 0.006 0.37 0.006 N
TUSC2 0.41 0.002 −0.16 0.24 N 0.31 0.02 N
a

Genes that showed a significant correlation (P<0.05) between relative gene expression levels (RT qPCR data) and the concentration of 6-TGN, meTIMP or the meTIMP/6-TGN concentration ratio in the expanded patient cohort (n = 54).

b

Significant (P<0.001) positive (P) or negative (N) correlations observed in the microarray data of the explorative patient cohort (n = 21) are indicated.