Table 3. Population pairwise FST between the twenty-eight populations significantly differentiated calculated with ARLEQUIN software.
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | |
1 | / | *** | *** | *** | *** | *** | ns | *** | *** | *** | * | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
2 | 0.39 | / | *** | ns | *** | *** | ns | *** | *** | ns | * | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
3 | 0.38 | 0.19 | / | * | *** | *** | * | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
4 | 0.47 | 0.66 | 0.24 | / | ns | ns | ns | ns | ns | ns | ns | *** | *** | *** | *** | *** | *** | * | *** | *** | * | *** | *** | *** | *** | *** | *** | *** |
5 | 0.22 | 0.11 | 0.14 | 0.01 | / | *** | ns | *** | *** | ns | ns | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
6 | 0.30 | 0.22 | 0.27 | 0.10 | 0.13 | / | * | *** | * | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
7 | 0.07 | 0.22 | 0.20 | 0.10 | 0.01 | 0.16 | / | * | ns | ns | ns | *** | *** | *** | *** | * | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
8 | 0.27 | 0.22 | 0.26 | 0.01 | 0.10 | 0.06 | 0.10 | / | ns | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
9 | 0.26 | 0.23 | 0.28 | 0.06 | 0.08 | 0.08 | 0.08 | 0.04 | / | * | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
10 | 0.29 | 0.07 | 0.22 | 0.02 | 0.02 | 0.13 | 0.05 | 0.14 | 0.12 | / | ns | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
11 | 0.15 | 0.17 | 0.17 | 0.08 | 0.02 | 0.16 | 0.08 | 0.13 | 0.13 | 0.04 | / | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** | *** |
12 | 0.63 | 0.54 | 0.58 | 0.43 | 0.46 | 0.51 | 0.54 | 0.45 | 0.49 | 0.49 | 0.50 | / | *** | * | *** | *** | *** | *** | * | *** | *** | *** | ns | *** | *** | *** | *** | *** |
13 | 0.70 | 0.57 | 0.60 | 0.53 | 0.48 | 0.52 | 0.64 | 0.45 | 0.52 | 0.55 | 0.55 | 0.11 | / | * | *** | * | * | * | ns | * | *** | *** | ns | *** | *** | *** | *** | *** |
14 | 0.63 | 0.50 | 0.54 | 0.35 | 0.42 | 0.46 | 0.50 | 0.39 | 0.45 | 0.44 | 0.45 | 0.04 | 0.04 | / | *** | ns | *** | * | ns | *** | *** | *** | * | *** | * | *** | *** | * |
15 | 0.61 | 0.49 | 0.54 | 0.37 | 0.40 | 0.46 | 0.49 | 0.40 | 0.45 | 0.43 | 0.45 | 0.05 | 0.18 | 0.09 | / | *** | *** | *** | *** | *** | *** | *** | * | *** | *** | *** | *** | *** |
16 | 0.70 | 0.54 | 0.58 | 0.46 | 0.45 | 0.48 | 0.61 | 0.40 | 0.49 | 0.50 | 0.50 | 0.17 | 0.08 | 0.06 | 0.22 | / | * | ns | ns | nsns | ns | *** | *** | *** | * | *** | *** | ns |
17 | 0.68 | 0.56 | 0.60 | 0.46 | 0.47 | 0.51 | 0.59 | 0.43 | 0.50 | 0.52 | 0.52 | 0.10 | 0.08 | 0.06 | 0.17 | 0.06 | / | *** | ns | *** | *** | *** | * | *** | *** | *** | *** | ns |
18 | 0.67 | 0.52 | 0.55 | 0.44 | 0.42 | 0.47 | 0.56 | 0.40 | 0.47 | 0.46 | 0.47 | 0.13 | 0.15 | 0.08 | 0.20 | 0.13 | 0.12 | / | ns | * | * | * | ns | *** | ns | *** | *** | * |
19 | 0.65 | 0.54 | 0.58 | 0.43 | 0.45 | 0.49 | 0.54 | 0.41 | 0.48 | 0.49 | 0.49 | 0.06 | 0.02 | 0.02 | 0.13 | 0.04 | 0.02 | 0.04 | / | * | *** | * | ns | *** | ns | ns | *** | *** |
20 | 0.64 | 0.56 | 0.59 | 0.44 | 0.48 | 0.52 | 0.55 | 0.44 | 0.50 | 0.52 | 0.53 | 0.15 | 0.05 | 0.07 | 0.17 | 0.02 | 0.10 | 0.11 | 0.05 | / | *** | *** | * | *** | *** | *** | *** | * |
21 | 0.60 | 0.21 | 0.54 | 0.38 | 0.43 | 0.46 | 0.50 | 0.40 | 0.45 | 0.46 | 0.46 | 0.21 | 0.12 | 0.14 | 0.18 | 0.05 | 0.14 | 0.18 | 0.11 | 0.06 | / | *** | *** | *** | *** | *** | *** | * |
22 | 0.72 | 0.64 | 0.66 | 0.62 | 0.55 | 0.59 | 0.67 | 0.52 | 0.59 | 0.63 | 0.62 | 0.17 | 0.12 | 0.16 | 0.30 | 0.23 | 0.14 | 0.09 | 0.06 | 0.18 | 0.26 | / | ns | *** | *** | *** | *** | *** |
23 | 0.65 | 0.51 | 0.54 | 0.40 | 0.41 | 0.46 | 0.51 | 0.39 | 0.45 | 0.43 | 0.43 | 0.08 | 0.06 | 0.05 | 0.15 | 0.15 | 0.08 | 0.03 | 0.01 | 0.09 | 0.15 | 0.01 | / | * | * | *** | *** | *** |
24 | 0.64 | 0.52 | 0.57 | 0.40 | 0.45 | 0.50 | 0.54 | 0.44 | 0.49 | 0.46 | 0.49 | 0.06 | 0.20 | 0.08 | 0.09 | 0.24 | 0.16 | 0.18 | 0.11 | 0.20 | 0.24 | 0.25 | 0.12 | / | *** | ns | *** | *** |
25 | 0.61 | 0.51 | 0.56 | 0.38 | 0.44 | 0.48 | 0.50 | 0.42 | 0.46 | 0.46 | 0.47 | 0.09 | 0.13 | 0.04 | 0.14 | 0.09 | 0.08 | 0.02 | 0.03 | 0.11 | 0.17 | 0.13 | 0.07 | 0.10 | / | *** | *** | *** |
26 | 0.60 | 0.51 | 0.55 | 0.39 | 0.44 | 0.48 | 0.50 | 0.42 | 0.46 | 0.46 | 0.46 | 0.05 | 0.09 | 0.07 | 0.09 | 0.16 | 0.12 | 0.10 | 0.06 | 0.15 | 0.19 | 0.17 | 0.08 | 0.03 | 0.04 | / | *** | *** |
27 | 0.73 | 0.61 | 0.63 | 0.58 | 0.52 | 0.56 | 0.67 | 0.52 | 0.59 | 0.57 | 0.59 | 0.33 | 0.52 | 0.37 | 0.32 | 0.49 | 0.43 | 0.45 | 0.41 | 0.42 | 0.42 | 0.56 | 0.44 | 0.29 | 0.28 | 0.25 | / | *** |
28 | 0.68 | 0.52 | 0.57 | 0.38 | 0.43 | 0.47 | 0.56 | 0.39 | 0.47 | 0.46 | 0.48 | 0.17 | 0.15 | 0.06 | 0.19 | 0.01 | 0.08 | 0.16 | 0.08 | 0.06 | 0.09 | 0.30 | 0.19 | 0.22 | 0.11 | 0.09 | 0.63 | / |
The significance level is shown above the diagonal, *indicates P<0.05, **indicates P<0.005, ***indicates P<0.0005; ns, non-significant. From line 1 to 11: H2 lineage (S. c. nanus, S. c. brachyceros and S. c. aequinoctialis); from line 12 to 28: H1 lineage (S. c. caffer); bold/italic written value: ecophenotype nanus. 1: Campo ma’an; 2: Lope; 3: Gamba; 4: Ngoto Forest; 5: Benoue; 6: Mole; 7: Arly, Pama, Singou; 8: Pendjari; 9: W; 10: Zakouma; 11: Bamingui-Bangoran; 12: Queen Elizabeth; 13: Lake Mburo; 14: Murchison falls; 15: Kidepo valley; 16: Laikipia; 17: Amboseli; 18: Nairobi; 19: Tsavo; 20: Masai Mara- Serengeti- Maswa; 21: Nakuru; 22: Arusha; 23: Kizigo; 24: Hwange-Chobe; 25: Kruger; 26: Gonarezhou; 27: Hluhluwe-Imfolozi; 28: Mount Elgon.