TABLE II.
Six SNPs in the 6 most consistently replicated genes/regions from the GWAS of asthma
SNP | Gene | Chromosome | BP | Location | Risk/minorallele | P value | ||
---|---|---|---|---|---|---|---|---|
SARP/CSGA/CAG | TENOR6 | GABRIEL3 | ||||||
rs2872507 | GSDMB | 17 | 35294289 | Flanking_3 | G/A | .006 | .054 | 5.70E-16 |
rs3939286 | IL33 | 9 | 6200099 | Flanking_5 | A/A | .0018 | .094 | 4.53E-14 |
rs13431828 | IL1RL1 | 2 | 102321085 | UTR | C/T | .0062 | .027 | 1.00E-10 |
rs1837253 | TSLP | 5 | 110429771 | Flanking_5 | C/T | .00076 | .053 | 3.03E-10 |
rs20541 | IL13 | 5 | 132023863 | Coding | T/T | .23 | .000417 | 1.95E-08 |
rs2395185 | HLA-DRA | 6 | 32541145 | Flanking_3 | T/T | .00077 | .00015 | 1.84E-04 |
BP, Base pair position based on hg18; UTR, untranslated region.