Table 7.
Co-locating candidate genes related to drought tolerance in the physical intervals delimited by meta-QTLs
mQTL | Gene name | Gene position | Gene ID from Gramene | Referencesa |
---|---|---|---|---|
mQTL_GY_1a | Cysteine synthase2(cys2) | 177027403–177032403 | GRMZM2G005887 | Zhang et al. (2008) |
mQTL_GY_1b | Exoglucanase1(exg1) | 276305014–276310701 | GRMZM2G147687 | |
Lethal embryo mutant1(lem1) | 281107355–281109091 | AC234157.1_FG002 | ||
Phosphohexose isomerase1(phi1) | 283086411–283088116 | GRMZM2G065083 | ||
Aldehyde oxidade (ZmAO3) | 285274032 | GRMZM2G124260 | Setter et al. (2011) | |
mQTL_ASI_3 | MADS-domain transcription factor (Zmm16) | 171427820–171430412 | GRMZM2G110153 | Whipple et al. (1997), Dwivedi et al. (2008), Setter et al. (2011) |
mQTL_GY_5 | petD | 209941448–209965363 | GRMZM2G427444 | Raab et al. (2006) |
Glutathione transferase24(gst24) | 211038250–211039523 | GRMZM2G032856 | Darko et al. (2011), Chen et al. (2012), Varga et al. (2012) | |
mQTL_GY_7 | Glutathione transferase23(gst23) | 128373591–128375197 | GRMZM2G416632 | Marrs (1996), Darko et al. (2011), Chen et al. (2012), Varga et al. (2012) |
Isoamylase-type starch debranching(iso3) | 129101506–129113096 | GRMZM2G150796 | ||
Glutathione S-transferase2(gst2) | 90200517–90201913 | GRMZM2G132093 | Marrs (1996), Darko et al. (2011), Chen et al. (2012), Varga et al. (2012) | |
mQTL_GY_10a | Cytochrome B6-F complex subunit 5 (petG) | 90315936–90316307 | GRMZM2G547408 | Hu et al. (2010) |
NADH dehydrogenase F(ndhF) | 90140275–90144126 | GRMZM2G405584 | Casagrande et al. (2001), Pastore et al. (2007) | |
mQTL_GY_10b | Lipoxygenase7(lox7) | 120216863–120221081 | GRMZM2G070092 | Gigon et al. (2004), Peng et al. (2011) |
Glutamine synthetase1 (gln1) | 146465615–146471079 | GRMZM2G098290 | Martin et al. (2006), Swarbreck et al. (2011), Yu et al. (2012) | |
Transcription factor (myb2) | 140048665–140050182 | GRMZM2G081557 | Cominelli et al. (2005), Dubos et al. 2010 |
aStudies reporting the active involvement of these genes with drought tolerance in maize or other species. Authors not listed in the reference section could be found in the supplementary reference