Table 1. Conservation of the consensus minimal Bmp3 upstream Evolutionary Conserved Region (minECR) in RefSeq animal genomes.
Accession Number | minECR | Distance from Bmp3 (nt) | ||||
Location | % Identity | 5′ | 3′ | |||
Rodentia | M. musculus | NC_000071.6 | 95552942.95553250 | 79% | −1497 | −1189 |
R. norvegicus | NC_005113.3 | 12332541.12332253, complement | 82% | −1511 | −1223 | |
AC_000082.1 | 10827337.10827049, complement | 82% | −1511 | −1223 | ||
C. porcellus | NT_176414.1 | 5088909.5089198 | 80% | −1789 | −1500 | |
C. griseus | NW_003616697.1 | 55307.54999, complement | 82% | −1611 | −1303 | |
Primates | H. sapiens | NC_000004.11 | 81950009.81950305 | 97% | −2110 | −1814 |
AC_000136.1 | 77693899.77694195 | 97% | −2111 | −1815 | ||
P. troglodytes | NC_006471.3 | 49002602.49002306, complement | 97% | −2101 | −1805 | |
P. abelii | NC_012595.1 | 84489849.84490145 | 97% | −2120 | −1824 | |
M. mulatta | NC_007862.1 | 48535985.48535688, complement | 96% | −2137 | −1840 | |
N. leucogenys | NW_003501411.1 | 13030680.13030976 | 96% | −2109 | −1813 | |
C. jacchus | NC_013898.1 | 113372870.113372574, complement | 96% | −2772 | −2476 | |
Other Orders | B. taurus | AC_000163.1 | 97583173.97583469 | 93% | −2360 | −2064 |
NC_007304.5 | 99175053.99175349 | 93% | −2360 | −2064 | ||
S. scrofa | NC_010450.3 | 146200934.146200644, complement | 78% | −1914 | −1624 | |
C. lupus familiaris | NC_006614.2 | 8169902.8170198 | 87% | −2135 | −1839 | |
A. melanoleuca | NW_003217292.1 | 2528248.2527953, complement | 92% | −2167 | −1872 | |
E. caballus | NC_009146.2 | 55766669.55766369, complement | 90% | −741 | −441 | |
O. cuniculus | NC_013683.1 | 69240613.69240317, complement | 86% | −2347 | −2051 |
Species are separated by taxonomic order. Distance from Bmp3 is calculated from the annotated transcription start site. nt: nucleotide.