Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2013 Feb 22;8(2):e57142. doi: 10.1371/journal.pone.0057142

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© 2013 Moore et al

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

PMC Copyright notice

A. The standard workflow of the application. The only manual step (the optional review) is depicted as a trapezoid. B. A system diagram depicting how WormSizer interacts with Fiji. WormSizer is written in Java as a Fiji plugin. Fiji plugins written in Java can utilize other Fiji plugins as well as any 3^rd party Java library. C. The output of WormSizer. Each worm in an input image is identified separately from others. Its contour is highlighted in yellow, its skeleton in blue, and the sampled radii in cyan. This image is shown to users and may be manually passed or failed. D. The volume calculation of WormSizer.