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. 2013 Feb 22;8(2):e56690. doi: 10.1371/journal.pone.0056690

Figure 6. Correspondence of classifier score and biological differentiation criterion.

Figure 6

Per cell we measured the longest neurites Inline graphic and diameters Inline graphic on day Inline graphic (blue) and Inline graphic (red) without (circles) and with mitomycin (triangles) of cells receiving NGF stimulation. Transparent points represent individual cell and neurite length measurements per image and bold symbols depict the respective mean values (with Inline graphic% c.i.) of the classifier score (Inline graphic) of image Inline graphic and the quantity Inline graphic on the given day. If this value is larger than Inline graphic, marked by the vertical dotted line, the length of the longest neurite of a cell is at least Inline graphic times the cell diameter. This is a commonly used biological threshold criterion for differentiation. The correlation with the respective FDA scores is Inline graphic and the fitted linear regression line (black line, Inline graphic% c.i. shown in grey) has a positive slope of Inline graphic. Therefore, the neurite length to cell diameter ratio is proportional to the classifier score. The threshold of Inline graphic of the biological criterion corresponds to a threshold of Inline graphic of the classifier on average (horizontal dotted line), i.e. choosing this threshold for the FDA will result in a decision of the FDA which is (on average) equivalent to the biological definition.